Gene detail information of Glyur000236s00014217 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10940.2 | 7.00E-09 | transducin family protein / WD-40 repeat family protein |
| NR | AES73199.2 | 4.71E-19 | transducin/WD-like repeat-protein [Medicago truncatula] |
| trEMBL | tr|G7J574|G7J574_MEDTR | 2.00E-19 | Transducin/WD-like repeat-protein {ECO:0000313|EMBL:AES73199.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00236 | 10112 | 10678 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.676 |
| SRR1783600 | control | 10.832 |
| SRR1783602 | moderate drought stress | 20.964 |
| SRR1811619 | moderate drought stress | 21.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.168 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.548 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.834 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.850 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.960 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.164 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.387 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.281 |
| SRR2868004 | Drought Stress (root) | 13.271 |
| SRR2967015 | Control (root) | 15.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.409 |
| SRR9715740 | Leaf | 4.306 |
| SRR9715741 | Leaf | 8.408 |
| SRR9715739 | Root | 3.036 |
| SRR9715742 | Root | 10.810 |
| SRR9715743 | Root | 8.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.055 |
| SRR8749028 | MeJA induced 9h | 9.243 |
| SRR8749029 | MeJA induced 9h | 1.558 |
| SRR8749030 | Uninduced | 1.826 |
| SRR8749031 | Uninduced | 1.273 |
| SRR8749032 | Uninduced | 1.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.292 |
| SRR8400027 | Control - Root | 16.414 |