Gene detail

Gene detail information of Glyur000235s00019565

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G25390.1	4.00E-126	Protein kinase superfamily protein
NR	KHN29803.1	0	Putative serine/threonine-protein kinase [Glycine soja]
COG	YP_001958461.1	2.00E-24	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|P0C5E2\|Y1839_ARATH	5.00E-132	Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBL	tr\|K7N306\|K7N306_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G25471.1}

Sequence

Transcript Sequence

>Glyur000235s00019565.1
CTCATATTATTTGAGAATTAATCAGCTTTGTTGTTTTTGGTTAAGAATCCACCATTACTTGTTCCTCGTAAAGTTGGGAAATTAGGGATGTCTCCGGTGGATTTGTTATGTTTCGTCATGTTTTGTCACCTCGCGGTGATATTCTCCGCTGGGCATGGAAATGATCACCAATATAGCTGTCCACGCTCCTTCAGTTGTGGAAGTCTTGGCACATTCAATTACCCTTTCACCAAGGCAGAACAACCACACTGTGGCTTGCTACCCATACACGGCTGTGACGAGGAGGATCATTATTCACCCAAAAGCATCCAACTGGAGAAAAATGGAAAAACCAAACTGCTTATTGGCGTCGACGTTGACCACGACCAGAATACGATTTTGATTTTTGATGAAGATTTTCACAGGCGCTTGCAATACAATCCCTGCGACGCTCTGAACCACAGTTACACCCTTAATTCCCCTTCTCCCACGGTCTCTTTTTATGTCAAGTATAATGTAACCTTGTTCCAATGCAAACACGGCCACATTAAGAAGCCCCCCGAACATTATTTTAAACATGAGTGCCGTGACCGGGACTACGATTTCTATTATGACAGCCACCACCCCTCTCCTAATGAGGAGGCACGTACGCATAGCATCTTCTCATCCTGTTCGGCTCTTCAGTTTCCATCCAAAGACTCTACCGATACCAAAGACATTCTATCATTTGTATCTGGTCAGATGGTAGTTGAAGTAATGTTGTCTGCTGATTGTGATGAGTGCTGCAACCACAGAGGAGGCCACTGTCGCCTTGATCGCAATGAAAAGTTCTACTGTGACAATGAGTCCAAGAACAAGAGAAAATTATTGAAGCTGCTACTTGGGCTTGGACTTGGAATAGGTTTAACCATAGGCATTCTGATAATTGGATGCCTGATCTTGAGACGAAACCGATCGAGAAACACAGTTGGTGATGTGATTGATGATGATCATGTTCATCCCGACCCAAATCCAGATCCAGAGAATGGCAGTGTCTACTTTAGACTCCCTCTCTTCTCTTACAAGGAGCTACAAGAAGCCACAAATAATTTCCACCACGCCAACCAACTCGGAAGCGGAGGCTTTGGAAAAGTTTACTATGGAAAACTGCGAGATGGACGAGAAGTTGCTGTGAAGCGCTTATATGAGCACAACTACAGGCGAGTAGAACAGTTCAGGAATGAAATCGAGATCCTCACCCGCACCCGCCACACAAACCTCGTGTCCCTCTACGGCTGCAGCACATCAGGTGACAGTCACGAGCTACTGTTGGTGTACGAATATGTTCAAAACGGCACCGTTGCTTGTCATCTCCACGGTGGCGTAGCTAGAACAACCCTGCTGCCGTGGCATATCAGAATGAAAATCGCCATAGAGACCGCAAGTTCACTGGCCTATCTGCACGCCTCTGACATCATCCACCGTGATGTGAAAACCAAGAACATTCTCCTCACCAACAGCTTCGGTGTCAAAGTCGCNGACTTTGGCCTTTCGAGGTTATTCCCCCACGATGTTACCCATGCTTCCACGGCACCACAGGGTACCCCTGGTTACGTTGACCCAGATTATCACCAATGCTACCAGCTCACTACCAAGAGTGATGTGTACAGTTTTGGGGTTGTGCTCATTGAGCTGATATCATCTATGCCTGCTGTTGATATGAGCAGGAGGCATAAGGATGACATTAACCTGTCAAACTTGGCCTTAAAGAAGATCCAACGAGGTGCATTTAGTGAGCTGGTGGATCCTTCTCTTGGTTTTGATTCAGATAACGAGGTTAAGAGGATGGTAGTTTCTGTGGCGGAATTGGCTTTTCAGTGTTTGCAAAGGGACAAGGAATTGAGACCTTCCATGGATGAGGTACTGAAGGTGCTGATGAGAATTGAAAGTGGGAAGGATGAGAATGTTGTGGCTGAGGAAGATGTGCGTCCACCGTCTCCACCTTCACCAGATGGGGATGAGAATATGGGATTGTTCAAAAAATCAGTGTTGCCATCACCGCCTTCACCTAAAGCCGTGGTTGATACATGGGATAGTGAATCTACTACTCCTAATGCCAGTGACTCTACCGATACCAAAGACATTCTATCATTTGTATCTGGTCAGATGGTAGTTGAAGTAATGTTGTCTGCTGATTATGATGAGTGCTGCAACCACAGAGGAGGCCACTGTCGCCTTGACGACAATAACAAGTTCTACTGTGACAACGGGTGCTCGGTGGCTGGATTAATTGTAGTGTTGATGATGGTCTTGGCTTGTTGCTTTAGTACAAAGATTTTTTCTCCTGCATATCTTTTATTTTTGAAGGAGGACCCAACTCATCAAATTATTGAGGAGTTTTTGAAGGAACATGGACCTCTTCCTGCACATAGGTACAATTATTCAGATGTCAAGAAAGTGACTAACTCTTTTAGAAACAAATTAGGCCAAGGAGGATATGGATGTGTATACAAAGGGAAGTTACATGATGGATGTGCGGTTGCAGTGAAGGTTTTAAGTGAATCCAAAGGGAATGGAGATGATTTCATTAATGAAGTTGCGAGTATTAGCAGGACTTCACATGTTAACATTGTTAGACTTTTGGGGTTCTGTTTGGATGGATCTAAAAAGGCACTAATATACGAATTCATGCCTAATGGATCTCTTGAGAAGTTCATATATGAAGAGAAAGAACCATTGTTGGATGACAACCAATTGGATTGTAGAACATTGTATGATATTGCAGTTGGCGTTGCCCGTGGATTAGAGTACTTGCACAGAGGCTGCAACACTAGAATATTTCATTTTGACATAAAACCTCACAACATATTACTAGATGAGAATTTCTGTCCAAAAATTTCAGATTTTGGACTTGCTAAAATATGCCAAAGAAAAGAGAGTGTTGTATCCATATTTGGTGCGAGAGGAACAGCAGGATATATTGCTCCAGAGTTGTTCTCCAGAAATTTCGGTGGTGTGTCACATAAATCAGATGTCTACAGTTATGGAATGATGGTCTTAGAAATGGTTGGCCAAAGAAATAATATTCAGGTTGAAGTTGATTGTTCTAGTGAGTTATATTTTCCACATTGGATTTACAAGCGTCTTGAATTAAATCATCAGCTTGGACTCCGATGTATCAAAAATGATATTGATGAAGAAATGATCTTCAGCTCATTTGTCATCTGA

Protein Sequence

>Glyur000235s00019565.1
MSPVDLLCFVMFCHLAVIFSAGHGNDHQYSCPRSFSCGSLGTFNYPFTKAEQPHCGLLPIHGCDEEDHYSPKSIQLEKNGKTKLLIGVDVDHDQNTILIFDEDFHRRLQYNPCDALNHSYTLNSPSPTVSFYVKYNVTLFQCKHGHIKKPPEHYFKHECRDRDYDFYYDSHHPSPNEEARTHSIFSSCSALQFPSKDSTDTKDILSFVSGQMVVEVMLSADCDECCNHRGGHCRLDRNEKFYCDNESKNKRKLLKLLLGLGLGIGLTIGILIIGCLILRRNRSRNTVGDVIDDDHVHPDPNPDPENGSVYFRLPLFSYKELQEATNNFHHANQLGSGGFGKVYYGKLRDGREVAVKRLYEHNYRRVEQFRNEIEILTRTRHTNLVSLYGCSTSGDSHELLLVYEYVQNGTVACHLHGGVARTTLLPWHIRMKIAIETASSLAYLHASDIIHRDVKTKNILLTNSFGVKVADFGLSRLFPHDVTHASTAPQGTPGYVDPDYHQCYQLTTKSDVYSFGVVLIELISSMPAVDMSRRHKDDINLSNLALKKIQRGAFSELVDPSLGFDSDNEVKRMVVSVAELAFQCLQRDKELRPSMDEVLKVLMRIESGKDENVVAEEDVRPPSPPSPDGDENMGLFKKSVLPSPPSPKAVVDTWDSESTTPNASDSTDTKDILSFVSGQMVVEVMLSADYDECCNHRGGHCRLDDNNKFYCDNGCSVAGLIVVLMMVLACCFSTKIFSPAYLLFLKEDPTHQIIEEFLKEHGPLPAHRYNYSDVKKVTNSFRNKLGQGGYGCVYKGKLHDGCAVAVKVLSESKGNGDDFINEVASISRTSHVNIVRLLGFCLDGSKKALIYEFMPNGSLEKFIYEEKEPLLDDNQLDCRTLYDIAVGVARGLEYLHRGCNTRIFHFDIKPHNILLDENFCPKISDFGLAKICQRKESVVSIFGARGTAGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGQRNNIQVEVDCSSELYFPHWIYKRLELNHQLGLRCIKNDIDEEMIFSSFVI

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00235	219681	225300	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000235s00019565.1	PF00069.20	Pkinase	330	600	6.60E-48
Glyur000235s00019565.1	PF00069.20	Pkinase	783	987	1.70E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.154
SRR1783600	control	0.141
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.012

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.117
DRR006520	Root Summer glycyrrhizin high producing strain	0.067
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.069
DRR006524	Root Summer glycyrrhizin low producing strain	0.035
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.514
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.477

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.025
SRR2868004	Drought Stress (root)	0.043
SRR2967015	Control (root)	0.143

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	68.499
SRR9715740	Leaf	62.055
SRR9715741	Leaf	88.445
SRR9715739	Root	0.426
SRR9715742	Root	1.647
SRR9715743	Root	1.303

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.337
SRR8749028	MeJA induced 9h	0.938
SRR8749029	MeJA induced 9h	0.796
SRR8749030	Uninduced	1.701
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.067

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.054
SRR8400027	Control - Root	0.401