Gene detail information of Glyur000235s00019558 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68220.1 | 6.00E-62 | Protein of unknown function (DUF1218) |
| NR | XP_004497055.1 | 1.02E-124 | PREDICTED: uncharacterized protein LOC101514353 [Cicer arietinum] |
| trEMBL | tr|I3SEN8|I3SEN8_MEDTR | 3.00E-122 | Uncharacterized protein {ECO:0000313|EMBL:AFK38730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00235 | 164411 | 166005 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000235s00019558.1 | PF06749.7 | DUF1218 | 58 | 155 | 2.10E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 135.953 |
| SRR1783600 | control | 136.001 |
| SRR1783602 | moderate drought stress | 216.363 |
| SRR1811619 | moderate drought stress | 215.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 108.462 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 106.450 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 49.059 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.940 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 177.064 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 175.024 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.677 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 70.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.870 |
| SRR2868004 | Drought Stress (root) | 52.904 |
| SRR2967015 | Control (root) | 73.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.824 |
| SRR9715740 | Leaf | 63.178 |
| SRR9715741 | Leaf | 51.174 |
| SRR9715739 | Root | 79.331 |
| SRR9715742 | Root | 76.568 |
| SRR9715743 | Root | 79.761 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 158.092 |
| SRR8749028 | MeJA induced 9h | 101.053 |
| SRR8749029 | MeJA induced 9h | 79.072 |
| SRR8749030 | Uninduced | 9.308 |
| SRR8749031 | Uninduced | 1.258 |
| SRR8749032 | Uninduced | 13.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 87.273 |
| SRR8400027 | Control - Root | 84.377 |