Gene detail

Gene detail information of Glyur000235s00019546

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G15060.1	8.00E-179	Uncharacterised conserved protein UCP031088, alpha/beta hydrolase
NR	XP_004497043.1	0	PREDICTED: uncharacterized protein LOC101511016 isoform X1 [Cicer arietinum]
COG	YP_006440644.1	9.00E-16	alpha/beta hydrolase fold containing protein [Turneriella parva DSM 21527]
trEMBL	tr\|K7N313\|K7N313_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G25590.2}

Sequence

Transcript Sequence

>Glyur000235s00019546.1
ATGGCTATCATCCAATACGATCCATTCCTTTCTTTGTGCAAAGTTTCTTCATCCTTCCGCTNCCTCCCACGCGCCGCCGCGCCCCTTCGCCCGACGGTCAGGGTAAGGGCCTTCTCCACCGCCGTCCACGATAAGCCCTCCATTTGCACCGCCGACGAACTCCACTATGTTTCCCTCAACAATTCCGATTGGAAGCTCGCCCTCTGGCGCTACCACCCTTCTCCTCAGGCACCTCCCAGGAATCATCCTCTGCTGCTCTTGTCAGGAGTGGGGACCAACGCCATTGGATATGACCTTTCCCCTAGGTCGTCATTTGCACGTTACATGTCTGGTCAGGGATTTGAAACTTGGATTCTTGAAGTACGGGGAGCTGGGTTGAGTCTTCAGGGTTCAAATTCCAAAGATATTGAACAGTCTGCCCATGCAATGTCTGAGAAGATGGAAGATGCTTTAGAAAGTACAATCAATGGAGCCGTGTCTTCAAAAACAGAATTGAATAACATATCTTGTGCAGTATCTGAACCTGACATTGCTGCCTCAAAAGGAGATGAAACTAAGAATGTGGCTGGCAATGGAGACCTGAATCGGTTAGCTACTGTTTGGGATGAATCAAAGTTAGTGGCAAGGTTGTCTGAGACTTTTATGCGTTTGTCAGAAAGAGTCTCTGGGTTTCTTAGTGAAAGTCAATCAAAGGTCATGTCTGCCAAATTACTTGATCAGATTTCAAAACTTTTGGTGGATTCCCCATTATATGAACAATTCAATGAGGTAAGGGGAAAGCTTGCAACTTTGTTGGAAACAAGACAAAACTCTGGTATTACTAGTCAAATAACTGATCTGAGTCAAAAGCTAGTAGATATTATTGAGGCAGGTCAGCTATCCGTTTCTCCTCCATTATTTGATCTACAAACCCGCTTTACTTCTACAGTAGAAGATTTTCAGAAGCAACTTGACTTGGTAGTGAAGTACAATTGGGACTTTGATCATTACCTGGAAGAAGATGTTCCTGCAGCGATAGAATACATTATGAAACAAAGCAAATCAAAAGATGGAAAATTGCTTGCAATTGGACACTCAATGGGTGGTATCTTGCTTTATTCAATGCTGTCACGGTATGGTTTTGAAGGAAAAGAACCCAGACTGGCTGCAGTAGTTACACTGGCATCATCTCTGGACTACACCCCATCCAAATCAACTTTGAAGTTACTCTTACCCCTTGCAGATCCTGCACAGGCTCTGAATGTCCCTGTTGTTCCTTTAGGGGCAATGTTATCAGCAGCTTATGAGGTTTCATCTCGCTCACCATATGCATTGAATGGGACCTTTTTTTACAAGGACCATCTACACAAAACCAATATACCTATTTTAGCTATTGCTGGAGACGAGGATCTGATTTGCCCACCTGAAGCAGTTGAAGAAACCGTTAAACTAATTCCTAAGCACCTGGTTACCTATAAAGTTTTTGGAGAACCCAAAGGCCCACATTATGCTCATTATGATTTGGTTGGAGGAAGACTGGCAGTGGAGCAGGTATATCCCTGTATTATTGAATTTCTTAGTTGTCACGACAAGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00235	98092	102958	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000235s00019546.1	PF12697.2	Abhydrolase_6	332	499	2.60E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.813
SRR1783600	control	2.961
SRR1783602	moderate drought stress	3.410
SRR1811619	moderate drought stress	3.104

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.347
DRR006520	Root Summer glycyrrhizin high producing strain	2.658
DRR006521	Root Winter glycyrrhizin high producing strain	1.938
DRR006522	Root Winter glycyrrhizin high producing strain	1.811
DRR006523	Root Summer glycyrrhizin low producing strain	3.370
DRR006524	Root Summer glycyrrhizin low producing strain	3.249
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.532
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.880

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.183
SRR2868004	Drought Stress (root)	9.676
SRR2967015	Control (root)	6.894

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.467
SRR9715740	Leaf	20.890
SRR9715741	Leaf	34.176
SRR9715739	Root	1.138
SRR9715742	Root	4.568
SRR9715743	Root	3.189

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.937
SRR8749028	MeJA induced 9h	17.700
SRR8749029	MeJA induced 9h	11.422
SRR8749030	Uninduced	27.433
SRR8749031	Uninduced	79.259
SRR8749032	Uninduced	31.068

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.947
SRR8400027	Control - Root	4.959