Gene detail

Gene detail information of Glyur000235s00019543

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G01190.1	6.00E-97	Octicosapeptide/Phox/Bem1p family protein
NR	XP_004497039.1	0	PREDICTED: putative uncharacterized protein DDB_G0271606-like isoform X1 [Cicer arietinum]
trEMBL	tr\|A0A072VQ77\|A0A072VQ77_MEDTR	0	Octicosapeptide/phox/Bem1p family protein {ECO:0000313\|EMBL:KEH44179.1}

Sequence

Transcript Sequence

>Glyur000235s00019543.1
AAAAAAAGAAAAAAGGGATCAGGATTGAAGAGAGGATCATGCGTGAAGTTACTACTTGCTACTATAGTATAATAGCATTAAATAGAGAGAGCATTACTCCCTCTTTTTCTTCTCTATTTTGCGCTGCAAAAAGGGGCACCCCAGCCGCAGCAGCCAAACAAGAGAGAGAGAGAGAAAAAAAAGAGAAAAAGAAAATCCAAAAATCTCTTTTTATGATGGAGACGCAAGCGCAAGCGCAACCTCCAACGCCAACGACAGCTCCGCCGCTATCCTCGGTGGCTCCGCCGCTATCCTCGGTGGCTCCGCCGCCACCGCACCTGAACTACCCTGACTCGGTTGACTCTTCCCCTCGTTCCCGCAACACGGACTCATGGGACGAGCCGTTCCCACCGGCGTCGACGAAGCTCCGCCTGATGTGCAGCTACGGCGGCCACATCGTCCCCCGTCCNCACGACAAGTCCCTCTGCTACGTCGGCGGCGACACACGCATCGTGGTGGTTGAACGCACCACCTCACTCACGGAACTCTCCACGCGCCTCTCCAAGACCTTCCTCAACGGAAGACCCTTCACTCTCAAGTACCAGCTCCCAAACGAAGACCTCGATTCCCTCATCTCCGTAACCACCGACGAAGACCTCGAGAACATGATCGACGAGTACGATCGCACAACCGCCGCCAATTCATCCATCAAACCCTCGCGAATTCGATTATTCCTATTCCCGACGAAGCCCGATTCCACTCACTCTATCCCTCCACAAATCCTCGATACCTCCGCCAAGTCAGAGGATTGGTTCCTCGACGCCCTAAACGGCGCCGGATTGCTCAACCGCGGATTCTCCGATTCCGCTTCTGTTAACTGTCTTTTGGGTCTCGATGATGACGTGGCAGGGAACNACATCGAGCCTGGGTCAAGGGAAGCTGTGGAGGGTGCTTCACAGCCTGGATCTTTTGGGAATTGCAAGAATTTGAAGCAGGATGTTCACTCTGTTCCCGATTCGCCTATGCTTGAGACGACGTCGTCTTTTGGGTCTACTTCTTCATCGCCGTCGCTGGCCAATTTACCTCCGATTAGGGTCCACGTGGAGGATGGTGGTTCTGGTGGTGGTGCTGGTGGGGTTAGGGTGGTGCAGCAGCAGCAGGATCAAAAGGTGTTGGGGATTGAGGAACAGTTTGCTCAGATGGGTGTTGGTGTTGTTGGTGTTGGGCAGAGGCAGGATGAGGGCTTTGTTGTGTTTTCTCCGCCGCCTCCTCCGGTACCGGTTACTCTCTCCGCCGCGGCCGTCGGTGTGCCGATCGGTCCTGNGGTGGTTGCCGGTGAATACCAGAACCGGGTTTTCTCCGATGATGAGAGATCGGATCATGGGGTGCCTGTGGGGTATAGAAAGCCACCAACTCCTCAGCCACAGGCACAGCCTCAGCAACAGCAACAGCCACAAGCACAGTCACATCCTGCTCAATTTCAACAGAAGTCAAGTGGCGGCGGCGTTGATTTGCCTTCACCCGATTCAGTTTCAAGTGATAGTAGTCTTTCAAATGCAATGTCTCGTCCAAAACCTGTGATCTATCAAGACCAAGTTCAGATTCAACCTGGAGCTACAAGGGTTCCTNGCAACCCTGTGGATCCGAAACTTAACATGTCTGATCAGCAGCATGGTCGGATCCAGATGCAGCAGCAGCAGCACGTACAGGACCCGGGGTATTTATTGCAACAGCAATTCGATCACCAGCAGCAGCAGCAACAGCCTCAACAGCAACAGCAGTTTATACACGGCACGCAATTCATTCACCACAACCCGGGAATTCCTGCATACTATCATGTATATCCTTCCCAGCAACAGCAACATCCCCAGGTTTACTATGTGCCTGCAAGACAGGCCCAAACTTATATGGGTGAATCCGCCACTGCAATCCCTTCTAGCCGTCCCCAAAACCCGCCCAATCCTGCCACATTGGTTCCACCAAATGCAGCCTACAACCCCATTAGAAACGCTCCCCTACCCAAAACTGAAATGACTGCAGCTGCTTACAGAACTGCTTCTGCAGGCAACCCTCAGTTGGTACAAATTCCTACAAATCAGCATCAGCAGCAACAATATGTCACTTACTCCCAGATCCACCATCCATCTCAGTCCATGGCCCCTACTTCTGCTGCCCCTCCCAATTATGCTTATGAATATGCGGATCCCGCTCATGCTCAAATATACTACTCTCAGCCTCTGGCGCCCTCAATGCCTTCCCAGTACCAGACCATGACAGCTGCTCCTGTGGTGATGCCAGAAGGTGCTCAGCATCCCTCAGACGGCATGAAGCAGCAGATAAGAACTTCACAGCCATTATAATACCAGCCCTACAGAAAAAATTTTGCTGCGCATGACCAAACAAAAACGTCCTTTGCCAAGTTTGAGGTTGATTCNTCTCGATGAAAGCTAAACCTTGAATTATCACCACCAGCATGCCAACGTCTAAATGAATTGCAGAAAAAGAAATTATTTCTTCCAGTTTTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00235	76926	80173	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000235s00019543.1	PF00564.19	PB1	138	228	2.60E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	317.182
SRR1783600	control	318.393
SRR1783602	moderate drought stress	440.079
SRR1811619	moderate drought stress	440.845

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	385.118
DRR006520	Root Summer glycyrrhizin high producing strain	378.829
DRR006521	Root Winter glycyrrhizin high producing strain	391.279
DRR006522	Root Winter glycyrrhizin high producing strain	380.981
DRR006523	Root Summer glycyrrhizin low producing strain	682.750
DRR006524	Root Summer glycyrrhizin low producing strain	679.832
DRR006525	Leaf Summer glycyrrhizin high producing strain	71.969
DRR006526	Leaf Summer glycyrrhizin high producing strain	71.728

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	143.561
SRR2868004	Drought Stress (root)	248.988
SRR2967015	Control (root)	238.931

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	53.781
SRR9715740	Leaf	44.454
SRR9715741	Leaf	76.619
SRR9715739	Root	161.935
SRR9715742	Root	268.189
SRR9715743	Root	235.899

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	268.992
SRR8749028	MeJA induced 9h	370.818
SRR8749029	MeJA induced 9h	258.835
SRR8749030	Uninduced	263.250
SRR8749031	Uninduced	258.136
SRR8749032	Uninduced	184.688

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	139.250
SRR8400027	Control - Root	134.236