Gene detail information of Glyur000234s00015096 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14630.1 | 8.00E-38 | |
| NR | XP_004504615.1 | 2.71E-120 | PREDICTED: protein XRI1-like [Cicer arietinum] |
| Swissprot | tr|Q6NLW5|XRI1_ARATH | 7.00E-12 | Protein XRI1 |
| trEMBL | tr|I1KRN8|I1KRN8_SOYBN | 6.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G09710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00234 | 210001 | 211416 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.277 |
| SRR1783600 | control | 9.364 |
| SRR1783602 | moderate drought stress | 12.568 |
| SRR1811619 | moderate drought stress | 12.407 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.492 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.385 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.253 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.247 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.669 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.598 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.828 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 55.049 |
| SRR2868004 | Drought Stress (root) | 51.001 |
| SRR2967015 | Control (root) | 71.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.295 |
| SRR9715740 | Leaf | 0.825 |
| SRR9715741 | Leaf | 1.736 |
| SRR9715739 | Root | 2.239 |
| SRR9715742 | Root | 6.915 |
| SRR9715743 | Root | 5.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.487 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.920 |
| SRR8400027 | Control - Root | 34.296 |