Gene detail information of Glyur000234s00015081 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G02170.2 | 3.00E-113 | Remorin family protein |
| NR | XP_004504623.1 | 0 | PREDICTED: uncharacterized protein LOC101497973 [Cicer arietinum] |
| Swissprot | tr|Q9M2D8|Y3126_ARATH | 2.00E-12 | Uncharacterized protein At3g61260 |
| trEMBL | tr|K7KQ23|K7KQ23_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G26610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00234 | 115279 | 119241 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000234s00015081.1 | PF03763.8 | Remorin_C | 389 | 497 | 3.70E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.104 |
| SRR1783600 | control | 10.172 |
| SRR1783602 | moderate drought stress | 8.161 |
| SRR1811619 | moderate drought stress | 8.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.434 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.231 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.395 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.381 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.699 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.663 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.189 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.760 |
| SRR2868004 | Drought Stress (root) | 8.565 |
| SRR2967015 | Control (root) | 9.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.347 |
| SRR9715740 | Leaf | 4.189 |
| SRR9715741 | Leaf | 2.535 |
| SRR9715739 | Root | 0.554 |
| SRR9715742 | Root | 4.555 |
| SRR9715743 | Root | 3.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.550 |
| SRR8749028 | MeJA induced 9h | 1.558 |
| SRR8749029 | MeJA induced 9h | 1.039 |
| SRR8749030 | Uninduced | 0.221 |
| SRR8749031 | Uninduced | 0.067 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.730 |
| SRR8400027 | Control - Root | 12.861 |