Gene detail information of Glyur000234s00015070 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G20150.1 | 1.00E-32 | |
| NR | XP_003531117.1 | 6.10E-50 | PREDICTED: uncharacterized protein LOC100778929 [Glycine max] |
| trEMBL | tr|I1K391|I1K391_SOYBN | 2.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G26530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00234 | 49910 | 52280 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 95.437 |
| SRR1783600 | control | 95.676 |
| SRR1783602 | moderate drought stress | 52.104 |
| SRR1811619 | moderate drought stress | 54.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 105.921 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 103.269 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 40.367 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 40.619 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 89.353 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 90.425 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.413 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 74.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 211.516 |
| SRR2868004 | Drought Stress (root) | 172.094 |
| SRR2967015 | Control (root) | 141.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 120.094 |
| SRR9715740 | Leaf | 87.807 |
| SRR9715741 | Leaf | 107.130 |
| SRR9715739 | Root | 56.554 |
| SRR9715742 | Root | 58.920 |
| SRR9715743 | Root | 55.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 78.452 |
| SRR8749028 | MeJA induced 9h | 37.276 |
| SRR8749029 | MeJA induced 9h | 83.432 |
| SRR8749030 | Uninduced | 25.862 |
| SRR8749031 | Uninduced | 32.479 |
| SRR8749032 | Uninduced | 28.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 147.173 |
| SRR8400027 | Control - Root | 163.509 |