Gene detail information of Glyur000234s00015066


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G45680.13.00E-45FK506-binding protein 13
NRXP_004504633.13.79E-90PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic-like [Cicer arietinum]
COGYP_002495568.15.00E-31FKBP-type peptidylprolyl isomerase [Methylobacterium nodulans ORS 2060]
Swissprottr|Q9SCY2|FKB13_ARATH1.00E-66Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic (Precursor)
trEMBLtr|I3SKG4|I3SKG4_MEDTR2.00E-85Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold002343835039626+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006457  protein folding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000234s00015066.1PF00254.23FKBP_C1071862.10E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.549
SRR1783600control8.520
SRR1783602moderate drought stress6.200
SRR1811619moderate drought stress6.201

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.946
DRR006520Root Summer glycyrrhizin high producing strain11.563
DRR006521Root Winter glycyrrhizin high producing strain4.798
DRR006522Root Winter glycyrrhizin high producing strain4.986
DRR006523Root Summer glycyrrhizin low producing strain10.620
DRR006524Root Summer glycyrrhizin low producing strain10.201
DRR006525Leaf Summer glycyrrhizin high producing strain156.841
DRR006526Leaf Summer glycyrrhizin high producing strain156.464

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)15.961
SRR2868004Drought Stress (root)16.990
SRR2967015Control (root)12.085

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf145.909
SRR9715740Leaf154.188
SRR9715741Leaf122.231
SRR9715739Root9.654
SRR9715742Root8.446
SRR9715743Root9.074

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.873
SRR8749028MeJA induced 9h4.738
SRR8749029MeJA induced 9h4.453
SRR8749030Uninduced2.904
SRR8749031Uninduced1.371
SRR8749032Uninduced2.809

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root25.908
SRR8400027Control - Root25.149

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved