Gene detail information of Glyur000232s00013781 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17880.1 | 3.00E-31 | Chaperone DnaJ-domain superfamily protein |
| NR | NP_001241283.1 | 7.56E-80 | uncharacterized protein LOC100800959 [Glycine max] |
| COG | NP_213481.1 | 7.00E-15 | chaperone DnaJ [Aquifex aeolicus VF5] |
| Swissprot | tr|Q9FYB5|DNJ11_ARATH | 8.00E-38 | Chaperone protein dnaJ 11, chloroplastic (Precursor) |
| trEMBL | tr|C6T675|C6T675_SOYBN | 3.00E-80 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G08190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00232 | 230486 | 230953 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000232s00013781.1 | PF00226.26 | DnaJ | 65 | 125 | 3.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 48.684 |
| SRR1783600 | control | 48.342 |
| SRR1783602 | moderate drought stress | 111.020 |
| SRR1811619 | moderate drought stress | 112.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 97.936 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 99.511 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 331.540 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 318.556 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 148.519 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 143.450 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 148.591 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 147.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 262.256 |
| SRR2868004 | Drought Stress (root) | 625.711 |
| SRR2967015 | Control (root) | 668.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1212.094 |
| SRR9715740 | Leaf | 772.938 |
| SRR9715741 | Leaf | 1476.237 |
| SRR9715739 | Root | 296.650 |
| SRR9715742 | Root | 246.035 |
| SRR9715743 | Root | 209.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 292.099 |
| SRR8749028 | MeJA induced 9h | 271.146 |
| SRR8749029 | MeJA induced 9h | 206.612 |
| SRR8749030 | Uninduced | 33.462 |
| SRR8749031 | Uninduced | 63.289 |
| SRR8749032 | Uninduced | 183.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 160.804 |
| SRR8400027 | Control - Root | 119.008 |