Gene detail

Gene detail information of Glyur000232s00013766

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G34950.1	2.00E-164	Major facilitator superfamily protein
NR	XP_004512144.1	0	PREDICTED: probable transporter MCH1-like [Cicer arietinum]
COG	YP_001212972.1	1.00E-09	arabinose efflux permease [Pelotomaculum thermopropionicum SI]
trEMBL	tr\|G7JXI0\|G7JXI0_MEDTR	0	MFS transporter {ECO:0000313\|EMBL:AES95151.1}

Sequence

Transcript Sequence

>Glyur000232s00013766.1
ATGGAATTTGCCATTCGTGATAGGAACAACACCCTGTCAAATGAAGTTCAGGACCTAATAATGCATGAAGAAATGGAGCATATAAATAACAACCGAGTGTTTGGAGGTGGAAAATGGCTAGGATTTGTTACAGCCATATGGGTTCAAGCAATCTGCGGAAACAATTACACTTTTGCCAACTACTCTGATGTATTGAAGAGCCTAATGGCTCTGACCCAGATGCAGCTCAACAATCTCTCTGTTGCCAAAGATGTTGGGAAGGCCTTTGATCGTTGGCCAACTTCAGTTATACTCATGATTGGAGCCATCATGGGATTCATAGGCTATGGTGTTCAATGGCTTGTTGTCAGCCAGAGAATCACTCCACTCCCTTATTGGCTGATGTGTGTATTCTTGTGTATGGGGGGCAACAGCACAACCTGGATGAACACAGCGGTGCTTGTGACTTGTATGAGGAATTTTCCCAAAAACCGTGGCCCAATTTCTGGTATCCTAAAGGGTTATGTGGGACTCAGCACAGCAATCTTCACAGACATATGCACTGCTTTGTTTTCCTCAGACCCTTCAAAGTTTCTGCTAATGCTCACCATTGTTCCCGCTGTCATTTGTCTTGTTGCTGCTCTTTTCCTTCATGAAACCCCACCAGCTTCTACTTGTGCAGAGGAAAAGCAAGAGACCCAATTCTTCAGTGCATTCAACTTGATTGCAGTTACAGTAGCCGTCTACCTCTTGGCCTTTGACATCACTGGACCTCATGCCCGTGTTCTTTCCTTGGTTTTCACAGCAGGACTTCTTATCCTCTTAGCCATGCCACTTCTAATTCCTTTATACTTGGCCATCTTCAAACCAAGTCCTAATCTTGACAAAGAAAAGCAGATTCATGAACCATTGCTGGCCCAACAAATTTCAGCAGAAAAGGAAGAGAGGAAGGAGGACCAGGAAGTGAGTGTGGGCACCAAGGTAGAGGGAGTTGAAACAAAACCAAAGCCAGTGATAGGGGAAGAGCATACCATCATTGAAATGGTGAAAACTGTTGATTTCTGGGTCTTGTTTGTGTCATTTCTCTGTGGCGTGGGAACAGGACTCTGTGTGATGAATAACATGGGGCAGATGGGACTAGCACTTGGTTACCCTGATGTTTCTATATTCATTTCCTTCATCAGCATATGGGGTTTCTTCGGACGCATTATTTCTGGCTCACTCTCAGAATACTGCATCAGGAAATCAGCCACACCAAGGCTAGTTTGGAATGCTGCTGCTCAAGTTCTGATGGTTATGGGTTACATTGCATTGGCCATGGCCTTGCCAGGATCACTTTACATTGGTTCAATGTTAGTGGGGATATGCTACGGAGTCCGTCTTACTATAACACCAGCAGCAGCTTCAGAGCTGTTTGGCCTCAAATACTATGGTTTATTGTACAACATCCTCATTCTCAACCTTCCCATTGGTTCCTTCCTCTTTTCTGGTCTCATTGCTGGTTATCTTTATGATGTTGAAGCCGCCAGTGTGCCCGGAGGAGGAAATACCTGCATTGGAGCACATTGTTACATGCTTGTGTATGTGATTATGGCCTTTGCTTGTGTGCTGGGTTGTGGATTGGACCTGCTGCTGGCAAGTATTGAATTTGCTTCTCATCCAAAGTCCAAACCAGGATTTGTCACAGCCATATGGGTTCAAGCAATCTGCGGAAACAATTATACTTTTGCCAAATACTCTGATATGCAGCTCAACAATCTCTCTGTTGCCAAAGATGTTGGGAAGGCCTTTGACACGTGTCACAGCCTAAGAATTCAGAAAGTTATAATGGTTCTGGATTTCATTGCATTGGCCATGGCCTTGCCAGGATCACTTTACATTGGTTCAATGTTGGTGGGGATATGCTACGGAGTCCGTGTTACTATAACACCAGCAGCAGCTTCGGAGCTATTTGGCCTCAAATACTATGGTTTATTGTACAACATCCTCATTCTCAACCTTCCTATTGGTTCCTTCCTCTTTTCTGGTCTCATTGCTGCCACCAATGTGCCCGGAGGAGGAAACACTTGCATTGGAGCACACTGTTACATGCTTGCGTATGTGATTATGGCCTTTGCTTGTGTCCTAGGATGTGGATTGGACCTGCTGCTGGCAGTTAGAACAAAGAAAATCTATTCCAAGATACACCTAGAGAGAACACTCGCCAATTCCCAAGTTCCAACACTGAGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00232	140767	145952	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000232s00013766.1	PF06813.8	Nodulin-like	38	276	2.60E-82
Glyur000232s00013766.1	PF06813.8	Nodulin-like	553	597	8.10E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.121
SRR1783600	control	0.124
SRR1783602	moderate drought stress	0.317
SRR1811619	moderate drought stress	0.328

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.456
DRR006520	Root Summer glycyrrhizin high producing strain	0.520
DRR006521	Root Winter glycyrrhizin high producing strain	5.175
DRR006522	Root Winter glycyrrhizin high producing strain	4.710
DRR006523	Root Summer glycyrrhizin low producing strain	0.563
DRR006524	Root Summer glycyrrhizin low producing strain	0.536
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.528
SRR2868004	Drought Stress (root)	0.822
SRR2967015	Control (root)	1.083

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.233
SRR9715740	Leaf	0.029
SRR9715741	Leaf	0.084
SRR9715739	Root	1.273
SRR9715742	Root	1.978
SRR9715743	Root	1.976

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.503
SRR8749028	MeJA induced 9h	292.405
SRR8749029	MeJA induced 9h	184.323
SRR8749030	Uninduced	36.095
SRR8749031	Uninduced	448.024
SRR8749032	Uninduced	265.479

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.949
SRR8400027	Control - Root	2.527