Gene detail information of Glyur000232s00013765 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66170.3 | 7.00E-41 | sulfurtransferase 18 |
| NR | XP_003517169.1 | 5.56E-81 | PREDICTED: rhodanese-like domain-containing protein 17-like [Glycine max] |
| COG | YP_003269879.1 | 3.00E-16 | rhodanese [Haliangium ochraceum DSM 14365] |
| Swissprot | tr|Q9FKW8|STR18_ARATH | 7.00E-51 | Thiosulfate sulfurtransferase 18 |
| trEMBL | tr|I1J8K5|I1J8K5_SOYBN | 2.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G37010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00232 | 137643 | 139253 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000232s00013765.1 | PF00581.15 | Rhodanese | 35 | 134 | 4.60E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.667 |
| SRR1783600 | control | 40.952 |
| SRR1783602 | moderate drought stress | 18.180 |
| SRR1811619 | moderate drought stress | 18.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.957 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.883 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 469.974 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 458.558 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.105 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.840 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.102 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.235 |
| SRR2868004 | Drought Stress (root) | 7.683 |
| SRR2967015 | Control (root) | 7.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.766 |
| SRR9715740 | Leaf | 0.610 |
| SRR9715741 | Leaf | 0.364 |
| SRR9715739 | Root | 15.045 |
| SRR9715742 | Root | 24.297 |
| SRR9715743 | Root | 19.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 404.534 |
| SRR8749028 | MeJA induced 9h | 1207.702 |
| SRR8749029 | MeJA induced 9h | 2770.261 |
| SRR8749030 | Uninduced | 1204.817 |
| SRR8749031 | Uninduced | 3706.378 |
| SRR8749032 | Uninduced | 3355.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.832 |
| SRR8400027 | Control - Root | 43.268 |