Gene detail

Gene detail information of Glyur000232s00013764

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G11000.1	3.00E-104	Seven transmembrane MLO family protein
NR	XP_003538881.1	0	PREDICTED: MLO-like protein 4-like [Glycine max]
Swissprot	tr\|O23693\|MLO4_ARATH	2.00E-135	MLO-like protein 4
trEMBL	tr\|K7LNK1\|K7LNK1_SOYBN	0	MLO-like protein {ECO:0000256\|RuleBase:RU280816}

Sequence

Transcript Sequence

>Glyur000232s00013764.1
ATGGGGGAAGAAAATGGAGAAGGAAGATCCTTGGCTGAAACCCCAACTTGGGCTGTGGCAACTGTCATCACTCTCTTGGTTTCTCTTAGTTTCTTGTCTAATGGCACATTGAAAAAATTGGTAAAGTGGTTGGACAGAACTAAGAGAAAATCCCTTCTTTCTACTGTGGGAAAGATCCAAGAAGAACTAATGCTTTTTGGGCTTCTGTCATTGCTGATGGGCCATTGGATTGTTTTTGTGGCTAAGATTTGCGTTAAGTCATCAGTATTGAACAACAGATTTTTTCCATGTGCAATGGAAAAGAGTTCTGGAGGAGTGGAACATATTTTCTGGTCGAGTTCAGAATATTCAAACAAAACAGTTCCCAAAGAGCAAGTGCACAATGGCCTGCATAATTATTGTCCTGAGCTTCATCGCTTTGTGTTTGTTCTTGGGATTACCCATGTTTCTTATAGCTTTGTTGCTGTTGCCCTGGCCATGATCAAGATATATAGCTGGAGAACGTGGGAAAATGAAGCAAAGACTATCGCTATACAACAAAGCTTACAAGATACTTCACAAAGTACATCAAGCACAAGATTGATGCGGCTTAGTACATTCATTTTTCACCACACATCCCATCCTTGGAGTCATCACAGAATTCTTGTTTGGCTGCTTTGTTTCAGCCGCCAATTCTGGAGTTCCATCAACAGAGCTGATTACATGGCATTGCGCTTAGGCTTCATTACTAATCATGACCTTCCCTTAACATACGATTTCCACAACTACATGCTTCGAAGCATGGATGAGGAATTTCGTGACATTGTAGGTCTTAGTGTGCCTCTCTGGATATATGCCGTATGCTGTATTTTTCTAAATTTTCATGGAAGCAACTTTTACTTTTGGCTTTCCTTTGTCCCAGCAATTTTGATCCTTATAATTGGTACTAAACTGCATCGAGTGGTGGTAAAGTTGGCTGTAGAAATAATAGATTGTTGCCCAGTTATGAAGCCTCACCAGTTTAACTTAAGAGATGAGCTCTTTTGGTTTGGAAAGCCAAGGCTTCTGTTGCGGTTAATACAATTGATATCCTTCTTGAATGCATTTGAAATGTCAACATTCTTGTGGTCCCTGTGGGAAATTAAAGATCCTTCTTGCTTCATGGACAACCGAAAGTTCATTGTGATCCGCTTGTCATTCGGGGTCGTCTCTCAAATGGGGTCAAGATTCAAGAAGACTGTGATCTCTGAAAGTGTGAGAAAATCACTATCTAAATGGCAGAGAAGGGTGAAGGACAAAGAAAGTTCCTCTTATGCACTCCTTAGTACTGCAACATCAACAGCATCATTGGAGTCTATGCTGAGTGGAATGGACAAGTCAAATCCATGTGGCTTGGTCAGTGAGGAAGGAAGTTCCTCAGGGACTAATAAAGACATTTGTTTCTCTAGCTCTAGTCTTGATGATGTGTCAAAGATCCAATGCAATGCACCATTTCCAAGTTATGAAGATCATGATGTACAATATGATTTGTCTCCCCCTCCACTGTCTTGAGACTGCTTTGCTTGTATTGTGGACAGTAGTGTGATGAATTGAATTGAATTGAATTGGAGTACATTTTATAACTTCCTCTCATGCTATTTGTAGTTTATAGCAAACCTATCTNTCATCTACAAACCACTAACTAATCATTTAAGTTTTGGTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00232	132293	136967	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006952 defense response

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000232s00013764.1	PF03094.10	Mlo	7	442	6.30E-120

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.282
SRR1783600	control	0.293
SRR1783602	moderate drought stress	0.312
SRR1811619	moderate drought stress	0.367

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.563
DRR006520	Root Summer glycyrrhizin high producing strain	0.652
DRR006521	Root Winter glycyrrhizin high producing strain	4.261
DRR006522	Root Winter glycyrrhizin high producing strain	4.466
DRR006523	Root Summer glycyrrhizin low producing strain	1.235
DRR006524	Root Summer glycyrrhizin low producing strain	1.091
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.171
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.165

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.666
SRR2868004	Drought Stress (root)	0.231
SRR2967015	Control (root)	0.150

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.567
SRR9715740	Leaf	0.019
SRR9715741	Leaf	0.170
SRR9715739	Root	0.204
SRR9715742	Root	0.589
SRR9715743	Root	0.759

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.226
SRR8749028	MeJA induced 9h	52.735
SRR8749029	MeJA induced 9h	40.763
SRR8749030	Uninduced	38.614
SRR8749031	Uninduced	175.276
SRR8749032	Uninduced	117.913

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.600
SRR8400027	Control - Root	0.996