Gene detail information of Glyur000232s00013759 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51290.2 | 4.00E-176 | Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) |
| NR | XP_003612207.1 | 0 | hypothetical protein MTR_5g022530 [Medicago truncatula] |
| trEMBL | tr|G7JXJ4|G7JXJ4_MEDTR | 0 | DUF630 family protein {ECO:0000313|EMBL:AES95165.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00232 | 93271 | 97139 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000232s00013759.1 | PF04783.7 | DUF630 | 1 | 60 | 6.00E-23 |
| Glyur000232s00013759.1 | PF04782.7 | DUF632 | 204 | 517 | 3.60E-99 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.072 |
| SRR1783600 | control | 4.083 |
| SRR1783602 | moderate drought stress | 3.834 |
| SRR1811619 | moderate drought stress | 3.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.168 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.365 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.459 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.396 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.071 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.049 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.428 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.642 |
| SRR2868004 | Drought Stress (root) | 4.724 |
| SRR2967015 | Control (root) | 6.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.644 |
| SRR9715740 | Leaf | 0.056 |
| SRR9715741 | Leaf | 0.334 |
| SRR9715739 | Root | 1.381 |
| SRR9715742 | Root | 2.573 |
| SRR9715743 | Root | 1.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.499 |
| SRR8749028 | MeJA induced 9h | 0.659 |
| SRR8749029 | MeJA induced 9h | 0.681 |
| SRR8749030 | Uninduced | 0.849 |
| SRR8749031 | Uninduced | 0.605 |
| SRR8749032 | Uninduced | 0.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.622 |
| SRR8400027 | Control - Root | 9.051 |