Gene detail information of Glyur000232s00013747


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G16720.12.00E-93Ribosomal protein L23/L15e family protein
NRXP_007155679.15.13E-141hypothetical protein PHAVU_003G222000g [Phaseolus vulgaris]
COGYP_004576948.19.00E-5550S ribosomal protein L15e [Methanothermococcus okinawensis IH1]
Swissprottr|O82528|RL15_PETHY5.00E-13360S ribosomal protein L15
trEMBLtr|V7CEA4|V7CEA4_PHAVU2.00E-141Ribosomal protein L15 {ECO:0000256|RuleBase:RU000663}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold002322180423954+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000232s00013747.1PF00827.12Ribosomal_L15e21932.60E-97


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control188.294
SRR1783600control190.011
SRR1783602moderate drought stress184.759
SRR1811619moderate drought stress183.795

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain318.788
DRR006520Root Summer glycyrrhizin high producing strain316.314
DRR006521Root Winter glycyrrhizin high producing strain136.075
DRR006522Root Winter glycyrrhizin high producing strain132.280
DRR006523Root Summer glycyrrhizin low producing strain242.418
DRR006524Root Summer glycyrrhizin low producing strain240.676
DRR006525Leaf Summer glycyrrhizin high producing strain98.248
DRR006526Leaf Summer glycyrrhizin high producing strain97.377

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)541.103
SRR2868004Drought Stress (root)323.513
SRR2967015Control (root)311.089

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf191.619
SRR9715740Leaf155.490
SRR9715741Leaf155.810
SRR9715739Root508.875
SRR9715742Root306.988
SRR9715743Root324.271

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h387.841
SRR8749028MeJA induced 9h152.099
SRR8749029MeJA induced 9h294.850
SRR8749030Uninduced43.331
SRR8749031Uninduced32.615
SRR8749032Uninduced56.277

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root430.820
SRR8400027Control - Root382.867

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved