Gene detail information of Glyur000231s00022083 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16850.1 | 9.00E-40 | |
| NR | XP_004507797.1 | 7.25E-123 | PREDICTED: uncharacterized protein LOC101506460 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1MSW2|I1MSW2_SOYBN | 3.00E-111 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G07570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00231 | 203020 | 203910 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.149 |
| SRR1783600 | control | 26.805 |
| SRR1783602 | moderate drought stress | 32.791 |
| SRR1811619 | moderate drought stress | 32.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.913 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.722 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.447 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.001 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.010 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.225 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.435 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.073 |
| SRR2868004 | Drought Stress (root) | 20.314 |
| SRR2967015 | Control (root) | 25.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.693 |
| SRR9715740 | Leaf | 4.104 |
| SRR9715741 | Leaf | 6.296 |
| SRR9715739 | Root | 34.180 |
| SRR9715742 | Root | 29.557 |
| SRR9715743 | Root | 29.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.613 |
| SRR8749028 | MeJA induced 9h | 8.818 |
| SRR8749029 | MeJA induced 9h | 6.026 |
| SRR8749030 | Uninduced | 4.810 |
| SRR8749031 | Uninduced | 4.305 |
| SRR8749032 | Uninduced | 8.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.162 |
| SRR8400027 | Control - Root | 30.259 |