Gene detail information of Glyur000231s00022072 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28020.1 | 3.00E-118 | |
| NR | XP_004507807.1 | 0 | PREDICTED: probable tRNA (adenine(37)-N6)-methyltransferase-like isoform X1 [Cicer arietinum] |
| COG | NP_967440.1 | 2.00E-36 | hypothetical protein Bd0451 [Bdellovibrio bacteriovorus HD100] |
| trEMBL | tr|I1LVU9|I1LVU9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G01370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00231 | 90692 | 95190 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000231s00022072.1 | PF01980.11 | UPF0066 | 101 | 230 | 2.30E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.013 |
| SRR1783600 | control | 2.042 |
| SRR1783602 | moderate drought stress | 1.749 |
| SRR1811619 | moderate drought stress | 1.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.392 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.911 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.950 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.819 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.677 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.533 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.173 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.658 |
| SRR2868004 | Drought Stress (root) | 12.113 |
| SRR2967015 | Control (root) | 12.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.778 |
| SRR9715740 | Leaf | 6.757 |
| SRR9715741 | Leaf | 6.076 |
| SRR9715739 | Root | 2.352 |
| SRR9715742 | Root | 3.721 |
| SRR9715743 | Root | 4.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.198 |
| SRR8749028 | MeJA induced 9h | 4.321 |
| SRR8749029 | MeJA induced 9h | 1.533 |
| SRR8749030 | Uninduced | 1.885 |
| SRR8749031 | Uninduced | 1.020 |
| SRR8749032 | Uninduced | 1.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.662 |
| SRR8400027 | Control - Root | 12.930 |