Gene detail information of Glyur000231s00022068 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57685.1 | 1.00E-17 | glutamine dumper 3 |
| NR | XP_007154804.1 | 1.74E-76 | hypothetical protein PHAVU_003G149300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FHH5|GDU3_ARATH | 1.00E-41 | Protein GLUTAMINE DUMPER 3 |
| trEMBL | tr|V7CBS3|V7CBS3_PHAVU | 6.00E-77 | Uncharacterized protein {ECO:0000313|EMBL:ESW26798.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00231 | 45671 | 46210 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 416.584 |
| SRR1783600 | control | 420.370 |
| SRR1783602 | moderate drought stress | 445.807 |
| SRR1811619 | moderate drought stress | 469.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 252.016 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 245.973 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 39.473 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 38.401 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 149.780 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 152.692 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.696 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 272.950 |
| SRR2868004 | Drought Stress (root) | 415.091 |
| SRR2967015 | Control (root) | 310.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.326 |
| SRR9715740 | Leaf | 1.150 |
| SRR9715741 | Leaf | 0.853 |
| SRR9715739 | Root | 176.350 |
| SRR9715742 | Root | 113.376 |
| SRR9715743 | Root | 117.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.348 |
| SRR8749028 | MeJA induced 9h | 35.254 |
| SRR8749029 | MeJA induced 9h | 28.077 |
| SRR8749030 | Uninduced | 0.991 |
| SRR8749031 | Uninduced | 0.748 |
| SRR8749032 | Uninduced | 1.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 306.765 |
| SRR8400027 | Control - Root | 240.010 |