Gene detail

Gene detail information of Glyur000230s00016889

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G61180.1	1.00E-59	LRR and NB-ARC domains-containing disease resistance protein
NR	XP_003624880.1	0	Disease resistance protein RPS2 [Medicago truncatula]
COG	YP_001278320.1	8.00E-14	NB-ARC domain-containing protein [Roseiflexus sp. RS-1]
Swissprot	tr\|Q940K0\|DRL15_ARATH	5.00E-64	Probable disease resistance protein At1g61180
trEMBL	tr\|G7L4T4\|G7L4T4_MEDTR	0	NBS-LRR type disease resistance protein {ECO:0000313\|EMBL:AES81098.2}

Sequence

Transcript Sequence

>Glyur000230s00016889.1
ATGCCTTACGTAACAGGTAAGGCAAATATAAGGAAGATGGAAATTGCTACCGGATTGGCAAGCGGAGCCGTCTCAAAAGGTGGAGAATTAGCAGTGGAGTCTGCCGTGAAGCAATTCAAATATCTCATCAGCCGAAAAAAAATTCTGGCCAATATGGACGAAGAACTTACGAATTTAAAAGGTGTGAAACAAGCAATGCAAAGGAGGGTGGACACAGAAAGCGACAAAGGATATGAAATTTTCTCTAATGTGCAAGACTGGCTCTCCCGCGTGGCAAAAATTGAAGAAGAGTTACAAAGTTTCAATGGAAATGAAGTTAACAAGAACAAGAAATGCTTTGGTGGGCTGTGTCCAGATTTGGCATTTAATTACTCACTGGGCAAGCGAGCCACTGAAAAAATAGAACATATTAAGAGCTTGAAGGAGGAAGGAGACAAATTTCGGGCCATGCCCATAATATCCTACCCTAAAGCTCCACCAACACTTGGGTCTACCTTCATAGAAAAGATCAAGAGCTTGGAGTCCAGAAACAAAAAAATGACGGAGGTCATAGAGAAACTGAAAGATGATAAGTTCAAAAGGATTGGCATATGTGGGATGGGTGGAGTGGGAAAAACCACACTGGTGAAAGAACTGATCAAAACCGTAGAAAAGAGTAAGCTATTTGATAAGGTTGCGATGGCAGTGGTATCCCAAAATCCAGATTATGAGAAGATCCAAATCTCAATCGCTGAATGTCTAGGCCTGGACTTGAAAAATCAGAGTCCAGATGGAAGAGGCAGGGAGTTGCTTCGGAGGTTGAAGGAAATTGATGTCCTAGTTGTGCTGGACGATGTGTGGGAGGGGCTTAACTTTGAGTTGATAGGACTTCCATCTCAAGATGATCAGAAGCGTACCAAAATATTGTTCACATCACGAAATAAGAAAGTGTGCCAAAAGATGGGAAGCCAGGAAAATGTTGAAGTGTCCGTGTTGTCGGAGGACGAAGCTTGGGGTCTATTTCAAGAGATGGCAGGAGATGTTGTAGATAAACAAGATATTAATCCAATAGCAAGAGAGGTTGCAAAGGAATGTGGTGGCTTGCCCCTTGCAATCGTTACAGTTGGAAGAGCACTAGGCGATGCGGAAAAGCCTACATGGGAGGATGCACTCGAACAATTAAGAAATTCTCAGTCATCTTCCTTCTCAGATGTGCAAAAATTTGTATACTCTCGCATCGAGCTTAGTTTCAAGTTTTTGGGTAGCGAAGAACACAAGTCCTTCCTTATGCTTTGTGGCTTGTTCCCAGAAGACTTTGACATTCCTGTTGAAAGTCTATTGCGTCATGGGGTGGGCTTGCGATTGTTCAAAGGCGTGGGTACTGCACTATGGAGAGCAAGAAATCGAGTGCATACTTTGGTGGGTGATCTGAAGAAATGTTTCTTATTGTTGGACAGTGATGTTCCAGGGTGTGTGAAGATGCACGATGTTGTACGTGATGTTGCCATATCTGTTGCAAATGCAGAGCATGGGTTTATGGTGCAACATGGCATTAAGAGGCTAGAAGAAGAGAACTTGAATGACATCAATGCAATATCATTCATCCTGGATGACACAAAGGAGTTAGAAAACTGCTTAGAGTGTCCAAACCTTAAACTTCTACAAGTAATTTCAAAAAGCAAGAAACCAAATCCGTTGCCTGAACATTTCTTCCAAGGTATGTGTGCACTGAAAGTTTTATCTATGCAAAATTTATGCATTCCAAAACTTCCATCTCTGTCCAAAGCCTCAGTCCACCTTCATACATTGCAAGTAGAAGGCTGTGATGTTGGAGATATATCCGTCATTGGAAAGGAGCTGAAAAAACTAGAAATCCTAAGTTTTGCCAACTCAAACATTAAAAAACTTCCTGTCGAAATTGGGGAACTGGAGTTTCTAAGATTATTGGATTTGACAGGATGTGANNATCTNAACTTTGTTTCTGTTNATGTCTTAGCAAGGTTGTCTCGATTGGAAGAGCTTTATTTCAAGNTAGCAAATTTTCCTTGGNTGNTAAACAAAGANGTTCTCAAAGAGTTAANAAATCTTTCTCAACNNCTGAAGGTTCTTGAGATCAAAGTANGNAAGNTAGAAATTTTACCCGACAATTTGANTTTTGAAAANCNAGAAAGATTTTGGGTTTATGTGGCTCCTTATGCTTCTTATGATCGTCGTGGATATTTGGAGCCAAATGTGTTACAACTAAGACTTGTACAATACAACTCTATTAAAAGGAATTTGATGACCAAGCATTTGGTTGAGAAATGTGAAGTTCTCATATTGGAGAAAGTGAAGGACTTGAAAAATGTCATCTANGAATTAGATGACAGTGGACTCCAATGCATGAAAGATCTAAGGATTGATTCTTGCCCCAATCTTGAGCATGTCATAGATTGGAGTGCTCCATGTTGTCCCTTCCCACTCATCAAGTCATTGTCTCTAACAAATCTTGCCCTTTTAAGGGAAATATTCCATGCATCTAGTCACCATGAAATCGAGAAATCAATGATCGGATTCTCAAATTTAGAGAAATTAAAGTTGAAAAAGCTCCCAAATTTGAGTTGCTTCGATAATGCTATTGATTTGAATGAGACCCATCATCCAATTCATGATCAGGGATTGAGTTCTATCAAATTAACTTATTCAACAAATATTGAGGATGGTGAAATATTATCTAGTTCACATTCAGAACCAACTGGTTGTGGACCCTTGTTTTCATCTAATTGGATGAAACAATTCCCAAAATTGGAAACAATATCTTTAGAAAAATGTCATTCCTTAGAGATGGTGTTTGACTTGGAAGGATATTCAGAATCTAATGGTCNTGCACNAGCTTTGNTGTTTCCTCAACTAAGAGAAATCGAGATATCANACCTNGNTAAACTATCATATGTGTGGGGTAATGGTCCACTTTGTGTTCAAGGCTTTCAAAATTTGAGAACTCTGACAATCTCAAATTGTGACTCTTTAAANTATGTGTTTACTTCTGACATTGNTANAGCAATNTTGAATCTTGAGGAACTGAAAGTAANATCTTGTGCGTCGATTGANAATCTGGTTTGGAGNNGGCCTGTTAATNAAGAGGACGACAATAAAGGGCATGAGACCGATATTGTGTTCCATAAACTATACCATTTATCACTTTCAGGACTTCCAAGGCTTGTGAGTATAATTCGTTCAAATTCTCTCAAGTTAAAATGTCCATCCTTGAGGCAATTTGAGATTGATGATTGTCCTGTGTTGGAGATATCTTTATCACCAACCCATATACATACAAACCAAGACATGTACAATCACAATGCCACATCTCCTGCAAACACAAAAGATATTGGATCTCGCAGTTTTAAAGAAAACAACTCAAGGTCGTCTCTTGGATGTCTACCCAAATTTATTCGCCAAGGAAACACAAATAAGAGAAGCAATGAGGATGTTTCACTAACACCAGCACAAGATCCTGTACCTTCCAATTTTGAAATGAAGATCAAGAAAGAAAAAGTTCACATGCCTGCTCTAGAAGACCTTCATGTGAAAGGATGTGAATTAATGCTGAGTGTATTATTTAATCTCAAAGAAAACTACAATTTCGATGTTCCATCACAATTGAAAACCATCAAAATCGAAAAGTGTGACAAGTTAAAAACCATTGTGGCTGGAACAGAAGAGAGAAAACACATGGTAAATTGTTTGGCTGGACTAGAGTCTCTTCACTTAAAAGAGTTACCAAATCTTGTGAAGTTTTGCTTGTTTGGAACCTATGAATCCTCAGACAAACGAAAGGACATGGTGGCACTACAAAGATCTGCAAAGGTGTTGGAGTGGACGGATCTCCGCAAAAAAGGAATGTTTGGATACTTCCTCAAAGAATCAAAAACAAAGATGAATATCAATGCATTTCATGAACTGTTAATGCTTGTTCCGTTCAATGAGATACGTATGGTTCAAAATGTGAGGAGACTCACCGTAAGCAATTGTGGTTCACTGGTCGAGGTGTTTGAATCAGGAAGGGGCGGAACAAAGAAAGGGGACGCCACCCCCACACGTTATGAGCTGGAAGATATGAGATTGATTGATTTGCCAAAGTTGAGTCACATATGGAAAGGCAATATTACGGAGGTTGTAAGCTTTTGGAAGCTAACATCTATTTATATTGAAAACTGCCACAGTTTGAAGAGTTTGCTCTCCCATTCCATGGCCAGAAGCTTTGTGCAGCTTGAAGAACTACGAGTTACAAGGTGTAAGATGATGGAGGAGATAGTTACAAAGGAAGAGGAGAACACCAAAGGAGGAAGTANAGTCAAGATCTTATTCCCCAAATTGAAGAGCTTGTCACTTTACGGTCTACCTAGGCTGGAATGTGTTTGTTCAGGTGATTATGACTATGATCTCCCATTGTGCAACGNTGAAGGGGACAAGAAGGAAATGAGTAACAATAAGGCTCAGATTTCATTTCCACAATTAAAGTCTTTTATGATTGGTGAAGTGCCAAAGCTTAAGTGTTTTTGCTCAGGAACATATGACTACGACATCCTGGGCTCATCAATTGAAGAGTGTCCAAAGATCGCAACCTTTCCCCATAGAAATGTAATAATAAGCACACCCAACCTTCACACAGTGGAATTTGGATACTTCAATGAAGTGCCAACACTTGGGGACGTTAATTTGACAATACATTACATCCAAAATGGAATGGAATACAAGGTGGAGTTGCAAGAATTAGAGACATTTAGAGGTATCGAGCAGCGAGATCAACGGCTTCTTGGCTACATCAGAAGAGTACGATATCTTGAGCTTCAAAACTGTCACAAGCTATTGAATTGCATCCCATCCAACATGATGCACTTATTCTCACATATGAGGAGACTCACTGCACGAGAATGTGAGTGCTTAGAAGAGATATTCGAATCAAATGATTGCGAAGAAGGGGATAACACGATGGGGTATGAATTATACACAATAGAATTGATTTCTCTGCCAAAACTGAAGCACATTTGGAAAAATCATGGTCAAATATTAGGCTATCGGAATTTGAAATGCATAGTTATCAAGCAGTGCCATGATTTGGAATACGTGTTTCCGAATGTTTCCATAGCCACGAGCCTTCCAAAATTGTGGTTCCCTTATGTGGAAGAATGCAACAAGATGGAGGAGATCATCCGGAATGATTCTGATTCTGATTTTCCTTCTGTACAACAACAACAACCAAAAGAGGCTAAGATCATATTCCCATCTTTGTGGGAAATTGGTACTAATACATTACCCAGCCTCAAATGTTTCTGTTCCAGCTCTTTCCCGTGCTATGTTGAGCTGCCACGTTGTGTAGGGTCAGAGATTAAAGGTTGTCGAGAGATGAAGACCTTTCTGGCTCAATGGCACCTTATATGCACCAGGGCTTCACTTCTTATATGTGGATGGTACCCGTTTTGA

Protein Sequence

>Glyur000230s00016889.1
MPYVTGKANIRKMEIATGLASGAVSKGGELAVESAVKQFKYLISRKKILANMDEELTNLKGVKQAMQRRVDTESDKGYEIFSNVQDWLSRVAKIEEELQSFNGNEVNKNKKCFGGLCPDLAFNYSLGKRATEKIEHIKSLKEEGDKFRAMPIISYPKAPPTLGSTFIEKIKSLESRNKKMTEVIEKLKDDKFKRIGICGMGGVGKTTLVKELIKTVEKSKLFDKVAMAVVSQNPDYEKIQISIAECLGLDLKNQSPDGRGRELLRRLKEIDVLVVLDDVWEGLNFELIGLPSQDDQKRTKILFTSRNKKVCQKMGSQENVEVSVLSEDEAWGLFQEMAGDVVDKQDINPIAREVAKECGGLPLAIVTVGRALGDAEKPTWEDALEQLRNSQSSSFSDVQKFVYSRIELSFKFLGSEEHKSFLMLCGLFPEDFDIPVESLLRHGVGLRLFKGVGTALWRARNRVHTLVGDLKKCFLLLDSDVPGCVKMHDVVRDVAISVANAEHGFMVQHGIKRLEEENLNDINAISFILDDTKELENCLECPNLKLLQVISKSKKPNPLPEHFFQGMCALKVLSMQNLCIPKLPSLSKASVHLHTLQVEGCDVGDISVIGKELKKLEILSFANSNIKKLPVEIGELEFLRLLDLTGCXXLNFVSVXVLARLSRLEELYFKXANFPWXXNKXVLKELXNLSQXLKVLEIKVXKXEILPDNLXFEXXERFWVYVAPYASYDRRGYLEPNVLQLRLVQYNSIKRNLMTKHLVEKCEVLILEKVKDLKNVIXELDDSGLQCMKDLRIDSCPNLEHVIDWSAPCCPFPLIKSLSLTNLALLREIFHASSHHEIEKSMIGFSNLEKLKLKKLPNLSCFDNAIDLNETHHPIHDQGLSSIKLTYSTNIEDGEILSSSHSEPTGCGPLFSSNWMKQFPKLETISLEKCHSLEMVFDLEGYSESNGXAXALXFPQLREIEISXLXKLSYVWGNGPLCVQGFQNLRTLTISNCDSLXYVFTSDIXXAXLNLEELKVXSCASIXNLVWXXPVNXEDDNKGHETDIVFHKLYHLSLSGLPRLVSIIRSNSLKLKCPSLRQFEIDDCPVLEISLSPTHIHTNQDMYNHNATSPANTKDIGSRSFKENNSRSSLGCLPKFIRQGNTNKRSNEDVSLTPAQDPVPSNFEMKIKKEKVHMPALEDLHVKGCELMLSVLFNLKENYNFDVPSQLKTIKIEKCDKLKTIVAGTEERKHMVNCLAGLESLHLKELPNLVKFCLFGTYESSDKRKDMVALQRSAKVLEWTDLRKKGMFGYFLKESKTKMNINAFHELLMLVPFNEIRMVQNVRRLTVSNCGSLVEVFESGRGGTKKGDATPTRYELEDMRLIDLPKLSHIWKGNITEVVSFWKLTSIYIENCHSLKSLLSHSMARSFVQLEELRVTRCKMMEEIVTKEEENTKGGSXVKILFPKLKSLSLYGLPRLECVCSGDYDYDLPLCNXEGDKKEMSNNKAQISFPQLKSFMIGEVPKLKCFCSGTYDYDILGSSIEECPKIATFPHRNVIISTPNLHTVEFGYFNEVPTLGDVNLTIHYIQNGMEYKVELQELETFRGIEQRDQRLLGYIRRVRYLELQNCHKLLNCIPSNMMHLFSHMRRLTARECECLEEIFESNDCEEGDNTMGYELYTIELISLPKLKHIWKNHGQILGYRNLKCIVIKQCHDLEYVFPNVSIATSLPKLWFPYVEECNKMEEIIRNDSDSDFPSVQQQQPKEAKIIFPSLWEIGTNTLPSLKCFCSSSFPCYVELPRCVGSEIKGCREMKTFLAQWHLICTRASLLICGWYPF

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00230	137851	145527	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000230s00016889.1	PF00931.17	NB-ARC	177	440	9.10E-57

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.064
SRR1783600	control	0.051
SRR1783602	moderate drought stress	0.132
SRR1811619	moderate drought stress	0.150

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.404
DRR006520	Root Summer glycyrrhizin high producing strain	0.362
DRR006521	Root Winter glycyrrhizin high producing strain	0.328
DRR006522	Root Winter glycyrrhizin high producing strain	0.300
DRR006523	Root Summer glycyrrhizin low producing strain	3.637
DRR006524	Root Summer glycyrrhizin low producing strain	3.440
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.187
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.203

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.198
SRR2868004	Drought Stress (root)	8.543
SRR2967015	Control (root)	10.011

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.799
SRR9715740	Leaf	0.022
SRR9715741	Leaf	10.419
SRR9715739	Root	0.000
SRR9715742	Root	2.856
SRR9715743	Root	2.157

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.559
SRR8749028	MeJA induced 9h	10.927
SRR8749029	MeJA induced 9h	6.661
SRR8749030	Uninduced	6.246
SRR8749031	Uninduced	20.302
SRR8749032	Uninduced	11.768

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.176
SRR8400027	Control - Root	0.134