Gene detail information of Glyur000230s00016884 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHG23008.1 | 1.08E-12 | hypothetical protein F383_00993 [Gossypium arboreum] |
| trEMBL | tr|K7MXV3|K7MXV3_SOYBN | 1.00E-11 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G29031.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00230 | 106539 | 107570 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 51.404 |
| SRR1783600 | control | 52.981 |
| SRR1783602 | moderate drought stress | 48.163 |
| SRR1811619 | moderate drought stress | 49.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 338.598 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 325.919 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 112.545 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 108.736 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 940.516 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 949.663 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 128.913 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 132.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 78.840 |
| SRR2868004 | Drought Stress (root) | 124.245 |
| SRR2967015 | Control (root) | 174.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 863.135 |
| SRR9715740 | Leaf | 273.474 |
| SRR9715741 | Leaf | 749.808 |
| SRR9715739 | Root | 18.635 |
| SRR9715742 | Root | 228.341 |
| SRR9715743 | Root | 175.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 338.811 |
| SRR8749028 | MeJA induced 9h | 303.399 |
| SRR8749029 | MeJA induced 9h | 684.366 |
| SRR8749030 | Uninduced | 1002.044 |
| SRR8749031 | Uninduced | 2707.915 |
| SRR8749032 | Uninduced | 2218.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 72.242 |
| SRR8400027 | Control - Root | 109.365 |