Gene detail

Gene detail information of Glyur000230s00016873

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G18120.1	8.00E-52	APR-like 7
NR	XP_003554021.1	3.32E-134	PREDICTED: 5'-adenylylsulfate reductase-like 5-like [Glycine max]
Swissprot	tr\|Q93YX4\|APRL5_ARATH	1.00E-76	5'-adenylylsulfate reductase-like 5 (Precursor)
trEMBL	tr\|I1N897\|I1N897_SOYBN	1.00E-134	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G28980.1}

Sequence

Transcript Sequence

>Glyur000230s00016873.1
CCATCATCAACATTACCAGACACTTTCCACTTTTAAGACAGAAAACATAAGAGGAGACAACGACATACATAGCACAATCCAACACAAACATAATCTCGTTTCTTTTCTGATTTGGTGTGCCTCGTGATAGTGTTTGTGTTCACTCTCTAAACATAATAACAAATANCCATTTTTCATTGGCTTCTTCAATAATCTGTAATGGCCACCTCGCTTCTTCTTCTCTTCATCACTTGTCTTTCTTTTCTACAATCCTCGTCTTCCCCAGTTCCAGTTCCAGTTCCAGTTCCAGTTCCAGCTTCTTCTTCCTTTTTCTATTCTCTTCAATCTCAATGCTCCCTCGCCAACTCCCCCAGCGCTCCTTTTCAGGTGGATGGGGATTTCGTAGAAGGGGTTTTNTCTGGCCGTAAGAGGGTCGGTTACATTTCTGTACTCTTCTATGCTTCCTGGTGCCCTTTCTCACGCAGAATGCTTCCTGAATTTGAAACTCTTAGTTCCATGTTTCCTCAAGTAGAACATGTGGCTCTTGAGCAATCATCCGCTTTGCCAAGGTTATATTCAAAATATGGAATCCATAGCTTGCCTGCTATCTTACTGGTGAACCAGACATCTAGAATGAGATATCNTGGATTTGAAGCCATGGATAATAATGTTGTTGGTCAACTAAGCAGACTGATGAGTGACGAAGATTCAACTGTGAAGTCATTGATGAGCTTCTCCCTCAAAGAAATATCAAGCAGGGAACCTTACTTAGCATTATGTATATTGTTTCTCTGTTTGAGGATCATTCTCTTTGTATTTCCCGAGATCATGTCGCGCCTCCAAGCATTCTGGGTTTCCTATGTTCCTCATTTGAACATGCAAATATTTGGCGAGACAAGCCANGTGATAGCACGCGTCCTTAACCTGATCGATGTCAGGAGGATTTGGACCAAGCTAAGACTATGCAAGACCAGGAACTTTCATGAAAGGGCGAGAAGCGTGCGGGTTTGGGCGTCATCTCTGGCTTCTGTTTCTCTGGGTGAGTCATCATCAGCTAGGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00230	36454	40261	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0045454 cell redox homeostasis

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000230s00016873.1	PF00085.15	Thioredoxin	74	139	7.60E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.932
SRR1783600	control	1.793
SRR1783602	moderate drought stress	3.663
SRR1811619	moderate drought stress	3.296

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.673
DRR006520	Root Summer glycyrrhizin high producing strain	3.748
DRR006521	Root Winter glycyrrhizin high producing strain	2.802
DRR006522	Root Winter glycyrrhizin high producing strain	2.578
DRR006523	Root Summer glycyrrhizin low producing strain	10.768
DRR006524	Root Summer glycyrrhizin low producing strain	10.297
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.115
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.221

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.158
SRR2868004	Drought Stress (root)	4.447
SRR2967015	Control (root)	5.598

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.095
SRR9715740	Leaf	2.661
SRR9715741	Leaf	1.944
SRR9715739	Root	1.135
SRR9715742	Root	2.187
SRR9715743	Root	1.104

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.004
SRR8749028	MeJA induced 9h	11.646
SRR8749029	MeJA induced 9h	8.714
SRR8749030	Uninduced	10.366
SRR8749031	Uninduced	11.034
SRR8749032	Uninduced	5.887

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.549
SRR8400027	Control - Root	3.089