Gene detail information of Glyur000230s00016872 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18130.1 | 2.00E-30 | |
| NR | AFK35214.1 | 2.75E-102 | unknown [Medicago truncatula] |
| trEMBL | tr|I3S4M2|I3S4M2_MEDTR | 1.00E-102 | Uncharacterized protein {ECO:0000313|EMBL:AFK35214.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00230 | 28859 | 30931 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.981 |
| SRR1783600 | control | 4.732 |
| SRR1783602 | moderate drought stress | 7.310 |
| SRR1811619 | moderate drought stress | 7.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.874 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.980 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.587 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.589 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.352 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.973 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.653 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.376 |
| SRR2868004 | Drought Stress (root) | 30.685 |
| SRR2967015 | Control (root) | 34.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.890 |
| SRR9715740 | Leaf | 43.738 |
| SRR9715741 | Leaf | 59.269 |
| SRR9715739 | Root | 2.340 |
| SRR9715742 | Root | 7.892 |
| SRR9715743 | Root | 6.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.779 |
| SRR8749028 | MeJA induced 9h | 52.036 |
| SRR8749029 | MeJA induced 9h | 17.559 |
| SRR8749030 | Uninduced | 51.521 |
| SRR8749031 | Uninduced | 76.316 |
| SRR8749032 | Uninduced | 28.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.120 |
| SRR8400027 | Control - Root | 14.178 |