Gene detail information of Glyur000230s00016869 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003624630.1 | 1.31E-16 | hypothetical protein MTR_7g085780 [Medicago truncatula] |
| Swissprot | tr|Q9LVC0|AGP14_ARATH | 4.00E-10 | Arabinogalactan peptide 14 (Precursor) |
| trEMBL | tr|G7KZH1|G7KZH1_MEDTR | 5.00E-17 | Transmembrane protein, putative {ECO:0000313|EMBL:AES80848.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00230 | 13701 | 15207 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 343.583 |
| SRR1783600 | control | 414.737 |
| SRR1783602 | moderate drought stress | 71.967 |
| SRR1811619 | moderate drought stress | 85.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 139.760 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 146.990 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 43.366 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 50.392 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 224.791 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 234.501 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 246.810 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 264.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 565.513 |
| SRR2868004 | Drought Stress (root) | 300.346 |
| SRR2967015 | Control (root) | 285.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 232.406 |
| SRR9715740 | Leaf | 199.162 |
| SRR9715741 | Leaf | 137.022 |
| SRR9715739 | Root | 98.814 |
| SRR9715742 | Root | 146.087 |
| SRR9715743 | Root | 130.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 869.829 |
| SRR8749028 | MeJA induced 9h | 585.608 |
| SRR8749029 | MeJA induced 9h | 1222.374 |
| SRR8749030 | Uninduced | 480.044 |
| SRR8749031 | Uninduced | 514.797 |
| SRR8749032 | Uninduced | 679.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 242.282 |
| SRR8400027 | Control - Root | 354.504 |