Gene detail information of Glyur000229s00018877 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | CBI19414.3 | 7.56E-10 | unnamed protein product [Vitis vinifera] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00229 | 148837 | 149347 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.387 |
| SRR1783600 | control | 2.288 |
| SRR1783602 | moderate drought stress | 2.595 |
| SRR1811619 | moderate drought stress | 2.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 178.401 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 180.378 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.743 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.977 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 289.518 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 289.086 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 69.327 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 74.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.354 |
| SRR2868004 | Drought Stress (root) | 94.580 |
| SRR2967015 | Control (root) | 271.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 422.876 |
| SRR9715740 | Leaf | 466.899 |
| SRR9715741 | Leaf | 563.255 |
| SRR9715739 | Root | 908.057 |
| SRR9715742 | Root | 982.246 |
| SRR9715743 | Root | 840.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 696.725 |
| SRR8749028 | MeJA induced 9h | 643.008 |
| SRR8749029 | MeJA induced 9h | 451.373 |
| SRR8749030 | Uninduced | 375.425 |
| SRR8749031 | Uninduced | 127.688 |
| SRR8749032 | Uninduced | 259.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 54.876 |
| SRR8400027 | Control - Root | 90.127 |