Gene detail information of Glyur000228s00011921 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11460.1 | 1.00E-22 | Protein of unknown function (DUF581) |
| NR | XP_003603497.1 | 1.98E-151 | hypothetical protein MTR_3g108290 [Medicago truncatula] |
| trEMBL | tr|G7JC95|G7JC95_MEDTR | 7.00E-152 | DUF581 family protein {ECO:0000313|EMBL:AES73748.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00228 | 199190 | 202877 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.817 |
| SRR1783600 | control | 25.629 |
| SRR1783602 | moderate drought stress | 14.104 |
| SRR1811619 | moderate drought stress | 13.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.194 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.363 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.079 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.831 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.265 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.151 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.591 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.441 |
| SRR2868004 | Drought Stress (root) | 4.955 |
| SRR2967015 | Control (root) | 4.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.185 |
| SRR9715740 | Leaf | 1.079 |
| SRR9715741 | Leaf | 0.350 |
| SRR9715739 | Root | 11.010 |
| SRR9715742 | Root | 5.898 |
| SRR9715743 | Root | 5.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.435 |
| SRR8749028 | MeJA induced 9h | 15.094 |
| SRR8749029 | MeJA induced 9h | 10.609 |
| SRR8749030 | Uninduced | 1.821 |
| SRR8749031 | Uninduced | 0.529 |
| SRR8749032 | Uninduced | 0.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.626 |
| SRR8400027 | Control - Root | 20.693 |