Gene detail information of Glyur000228s00011914 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G25730.2 | 0 | |
| NR | XP_004501262.1 | 0 | PREDICTED: uncharacterized protein LOC101502765 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7JCA1|G7JCA1_MEDTR | 0 | Zinc finger protein, putative {ECO:0000313|EMBL:AES73754.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00228 | 125764 | 162650 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.694 |
| SRR1783600 | control | 7.639 |
| SRR1783602 | moderate drought stress | 12.383 |
| SRR1811619 | moderate drought stress | 12.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.429 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.263 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.083 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.789 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.019 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.011 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.797 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.959 |
| SRR2868004 | Drought Stress (root) | 21.607 |
| SRR2967015 | Control (root) | 24.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.814 |
| SRR9715740 | Leaf | 11.938 |
| SRR9715741 | Leaf | 13.706 |
| SRR9715739 | Root | 1.647 |
| SRR9715742 | Root | 15.916 |
| SRR9715743 | Root | 12.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.176 |
| SRR8749028 | MeJA induced 9h | 9.036 |
| SRR8749029 | MeJA induced 9h | 4.755 |
| SRR8749030 | Uninduced | 6.171 |
| SRR8749031 | Uninduced | 7.858 |
| SRR8749032 | Uninduced | 6.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.750 |
| SRR8400027 | Control - Root | 19.650 |