Gene detail information of Glyur000228s00011913 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25580.1 | 3.00E-80 | |
| NR | XP_004501261.1 | 0 | PREDICTED: uncharacterized protein LOC101502464 [Cicer arietinum] |
| trEMBL | tr|V7AU23|V7AU23_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW09094.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00228 | 117564 | 121685 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.910 |
| SRR1783600 | control | 0.932 |
| SRR1783602 | moderate drought stress | 0.894 |
| SRR1811619 | moderate drought stress | 0.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.445 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.099 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.327 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.855 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.111 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.031 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.153 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.463 |
| SRR2868004 | Drought Stress (root) | 3.340 |
| SRR2967015 | Control (root) | 3.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.655 |
| SRR9715740 | Leaf | 3.188 |
| SRR9715741 | Leaf | 2.353 |
| SRR9715739 | Root | 0.004 |
| SRR9715742 | Root | 0.738 |
| SRR9715743 | Root | 0.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.115 |
| SRR8749028 | MeJA induced 9h | 7.586 |
| SRR8749029 | MeJA induced 9h | 5.487 |
| SRR8749030 | Uninduced | 2.869 |
| SRR8749031 | Uninduced | 1.528 |
| SRR8749032 | Uninduced | 1.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.354 |
| SRR8400027 | Control - Root | 3.921 |