Gene detail information of Glyur000228s00011907 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31130.1 | 1.00E-76 | Protein of unknown function (DUF1218) |
| NR | XP_004501257.1 | 1.07E-114 | PREDICTED: uncharacterized protein LOC101501291 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I3SNC3|I3SNC3_LOTJA | 1.00E-110 | Uncharacterized protein {ECO:0000313|EMBL:AFK41765.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00228 | 92372 | 95375 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000228s00011907.1 | PF06749.7 | DUF1218 | 59 | 156 | 3.40E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.337 |
| SRR1783600 | control | 12.662 |
| SRR1783602 | moderate drought stress | 17.008 |
| SRR1811619 | moderate drought stress | 17.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.979 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.842 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.960 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.479 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.787 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.262 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 78.437 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 77.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.433 |
| SRR2868004 | Drought Stress (root) | 73.039 |
| SRR2967015 | Control (root) | 68.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 150.443 |
| SRR9715740 | Leaf | 105.188 |
| SRR9715741 | Leaf | 181.736 |
| SRR9715739 | Root | 21.150 |
| SRR9715742 | Root | 11.910 |
| SRR9715743 | Root | 14.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.779 |
| SRR8749028 | MeJA induced 9h | 54.603 |
| SRR8749029 | MeJA induced 9h | 58.362 |
| SRR8749030 | Uninduced | 90.598 |
| SRR8749031 | Uninduced | 74.042 |
| SRR8749032 | Uninduced | 104.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.536 |
| SRR8400027 | Control - Root | 43.748 |