Gene detail

Gene detail information of Glyur000227s00015133.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G15840.1	BTB/POZ domain-containing protein
NR	XP_003528640.1	PREDICTED: uncharacterized protein LOC100806711 [Glycine max]
trEMBL	tr\|I1KMY7\|I1KMY7_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G37660.1}

Sequence

Transcript Sequence

>Glyur000227s00015133.1
GTGATTGGTAAGGGAGAAGATTCACAGGACAAAAAAAGGCAGAAGTGCAAATATCATTGTTCGATCGTTGTTGTTATTGACGCAATGACAGTATCACTGTGTCCGTGTGTTTGATCTGCTCTGCCCTCTGCTGCTGCATTATTCTCAATTTCTCAATTCTCAATGGTGATGGAGGACCCTCAGTATCCAAACAACCCTCCTCCACCACGACCCTATGAACACCAACACCAACATGCTCCCATTCCTAAGCCTCCATCGCAGCACTCCGACAACGATCGAAATGCTGCGGAGTTGCGTGCTCTCGATTGCAACCTCGCCTCCCTCTGCGACCATGTCCAAATCGAAGGTTTCAATTCCGGCTCTTTCTCCGATATCGTNGTCAATGCAATGGGCTCCACTTATCACCTCCATCGCCTCATCCTCTCCCGCAGTTCATATTTCAGGAACATGCTTCATGGACCATGGAAAGAAGCCGGTGCTCCTGTTGTGACTCTGCATGTTGATGATAAGAACGTTAATGACGAGGCAATTGCAATTTCTTTGGCATATCTATATGGACACCACCCTAAACTTAATGATGATAATGCATTTCGTGTTCTTGCTGCTGCTTCCTTTCTTGACCTTCAGGATTTATGTGCTATATGTACAGATTTCATTATCTCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGATTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGCTACCTTTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTACATGCATTACTGACATCTAATGATTTGTGGATACCCAGTGAAGAGAAGCGGTTTGAATTGGCTTTGCACGCATTCCTCGCAAAAAGTGCTCACTGCAAGGTTGAACATCCCGCACATGGAATTTCTGGTTCTGAGTCTACAACTGGCAGTCATTCCGATTCTGATAACAGCAAGGGAAAAAATGTAACTGATAGCTGCACTAATAAGAGGTTGGAAAGTGGCTTAGGGAAAATGAGTCTTAAAAGTGATCTAAAGGACCCTAGCAGTAGCACTCCTAATCTTCTTGCAGACTCAGTAGCAGACTTCAGCAATGGGGTTTCTGATTCCAATCAACAGGTTCAACAAGCTTCATATGTCATTTCATCAAACCTGAATCCAAGATATACTTGTGACATGGAAGGGCCTTCATTGGGTAATTCGTTGTCTGATACAGATAGGGTGAGAGCATCATGTTATGTTGAGGTGCCTCTTAGTGCTGGAACAACTGGTTTGGGAACCACTGGAGTGGGTATTGAAGGGCCATCCGAGGAAGGATCTTGCTACAATTTGGACAACNATAGTTTGCTAGTTAGGGATCAATCAAGACATTGCTTTTCATCAAGTTCTTTTAATGGGCTCACATCCAGTGAGTGGGGAAGATATGGAACACCTTTGCTATCATGGGGTGGCCATGTTGGCAGAAGACAGGTTAAAGCTCATCCCAGAGGAAACTATGGAGGTCTTGGAGATGAATATGATGTATTTCTTAATATATTTGAAGGGAGTTCACTTTTATATTGCAATATGTCTTTTGATGCACTTCTAAATGTCAGAAAGCAACTTGAAGAGCTAGGTTTCCCGTGCAAAGCTGTAAATGATGGTCTGTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCTGCTGATACATGCAAAATTTGTTCCCTTATGAGTATGGCTTGCACTTGCCAGAAGCAGTTTGCATTTTCACATGGAGCTACTACCTCTGGGTCTTACATACAAGAACATAATCATAACAATATGACTGGGAATGTAGGAAATATATATGTCGCTGAATCTTCNCTAGGCGAAAGAAATGGCCCTTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTACATTTGTTCCAGCATCTTCTTCACCTCCTACACGATTTGTCTTTTCTCGCGTACCATTTGGCGTTGGCAACAGAAACTACCCTCAGTCTGCAGCCAATGATGATCCAGAGACTCGTGCTGATCACAATGGAGACCTGNCTGGAGATGGATTGACGGCTTTGGTTGGGTTAAGCCAGGAAGGGAGTAATGGAACAAATGTGCATACAGAGCTAACACAAAGGGGATATGAAATGGGCTTGCAAAGCAGCATGNCTGGAACTACTGCTGGAGGTGCAAGTACTGGTGGCATTCCCATGCAGATGCTAGAGGCGCCGGAACATACCATTGGTATAGAATGGGAGAATGCCAACAGTTCTTCTATATCACTGGATTTGAAAACACCNTTAAGCCATTTCCCCCCTTTTCGCTTTGGTGTAAGTTTTGAGGATGTGCATAGGCTTGGTGATGGCCAGGTCAAGCATTCTCCAGAAGTTTTTTATGCTGGTTCTTTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCCCAGGGACGGCGTACCCTTGGGTTGTTTCTTCACCGTCGGAAGGCAGAGATAACTGATATACATAGAAAGGTACATATGTATGTTGACTCGCGTGAAAAGGTGACTGCACGCTATCAGTTGACTTGCCCATCCAAGAGGGAAATGATGGTGTTTGGAAGCTTTAAACAAACGGGTACTCTTCTACCTAAAGCCCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTATTTGATGAGCTTGATGATCTTCTCCAAAATGGGGCCCTGAGGGTCATTGCTGTAGAGATGAACGATGGTTCAGGCCTTCATTGTACATGATAAAAAATTGAGAATTATGAAGGTGCATATATTATTTTATGAACAGCATGTGATCAGTATGCCATACACGGTATACACCATTTTGCTTTGCCGTCTCTTCCATTATACGAGTAAGGCCTCGTGTACACATATAGATTTCCTTTTCTTTAATTTTTTNTTATTATTTTAGACTAACTACTGNCTGTGAGCTGGGCGATGATGTATGAGATAAAAGTTAGCTAGCTTCTAAGATTGCGTTTAATCATCCTTGTGTCGTGTTGATTTGGAAATGGAGGACTCTGTTTTATCAACGTGACCTAGTTATCTTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00227	160625	167196	-

Gene family

Gene family	subfamily
Transcription Factors Family	TRAF
Ubiquitin Family	BTB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000227s00015133.1	PF00651.26	BTB	63	167	9.80E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.378
SRR1783600	control	14.302
SRR1783602	moderate drought stress	12.242
SRR1811619	moderate drought stress	12.260

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.875
DRR006520	Root Summer glycyrrhizin high producing strain	13.689
DRR006521	Root Winter glycyrrhizin high producing strain	8.576
DRR006522	Root Winter glycyrrhizin high producing strain	8.456
DRR006523	Root Summer glycyrrhizin low producing strain	12.494
DRR006524	Root Summer glycyrrhizin low producing strain	12.301
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.879
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.833

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.404
SRR2868004	Drought Stress (root)	18.086
SRR2967015	Control (root)	18.565

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.069
SRR9715740	Leaf	6.755
SRR9715741	Leaf	7.852
SRR9715739	Root	5.465
SRR9715742	Root	13.684
SRR9715743	Root	12.178

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.246
SRR8749028	MeJA induced 9h	10.331
SRR8749029	MeJA induced 9h	4.668
SRR8749030	Uninduced	3.852
SRR8749031	Uninduced	2.067
SRR8749032	Uninduced	2.422

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.566
SRR8400027	Control - Root	20.738