Gene detail information of Glyur000227s00015129 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06890.1 | 8.00E-21 | |
| NR | XP_007035612.1 | 1.44E-43 | Uncharacterized protein TCM_021224 [Theobroma cacao] |
| trEMBL | tr|A0A061EPD5|A0A061EPD5_THECC | 5.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:EOY06538.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00227 | 127817 | 128176 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.764 |
| SRR1783600 | control | 35.203 |
| SRR1783602 | moderate drought stress | 37.515 |
| SRR1811619 | moderate drought stress | 36.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 60.226 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 66.654 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.760 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.053 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 114.902 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 101.380 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.183 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.064 |
| SRR2868004 | Drought Stress (root) | 20.436 |
| SRR2967015 | Control (root) | 36.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.191 |
| SRR9715740 | Leaf | 9.155 |
| SRR9715741 | Leaf | 27.625 |
| SRR9715739 | Root | 73.105 |
| SRR9715742 | Root | 128.376 |
| SRR9715743 | Root | 108.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 33.337 |
| SRR8749028 | MeJA induced 9h | 34.161 |
| SRR8749029 | MeJA induced 9h | 31.308 |
| SRR8749030 | Uninduced | 35.982 |
| SRR8749031 | Uninduced | 5.903 |
| SRR8749032 | Uninduced | 7.843 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.844 |
| SRR8400027 | Control - Root | 32.886 |