Gene detail information of Glyur000227s00015127 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49100.1 | 4.00E-25 | |
| NR | XP_007154176.1 | 4.79E-142 | hypothetical protein PHAVU_003G096600g [Phaseolus vulgaris] |
| trEMBL | tr|V7CA91|V7CA91_PHAVU | 2.00E-142 | Uncharacterized protein {ECO:0000313|EMBL:ESW26170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00227 | 107982 | 109406 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.536 |
| SRR1783600 | control | 16.898 |
| SRR1783602 | moderate drought stress | 10.438 |
| SRR1811619 | moderate drought stress | 10.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.304 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.159 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.078 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.076 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.384 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.350 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.085 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.641 |
| SRR2868004 | Drought Stress (root) | 12.954 |
| SRR2967015 | Control (root) | 12.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.613 |
| SRR9715740 | Leaf | 0.857 |
| SRR9715741 | Leaf | 0.335 |
| SRR9715739 | Root | 8.679 |
| SRR9715742 | Root | 6.041 |
| SRR9715743 | Root | 7.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.650 |
| SRR8749028 | MeJA induced 9h | 0.699 |
| SRR8749029 | MeJA induced 9h | 0.721 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.359 |
| SRR8400027 | Control - Root | 20.079 |