Gene detail information of Glyur000227s00015122 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49120.1 | 1.00E-20 | Protein of unknown function (DUF581) |
| NR | XP_003550346.1 | 1.61E-47 | PREDICTED: uncharacterized protein LOC100818870 [Glycine max] |
| trEMBL | tr|I1MRK2|I1MRK2_SOYBN | 6.00E-48 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G03090.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00227 | 69813 | 71128 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000227s00015122.1 | PF04570.9 | DUF581 | 52 | 99 | 4.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.729 |
| SRR1783600 | control | 10.935 |
| SRR1783602 | moderate drought stress | 34.547 |
| SRR1811619 | moderate drought stress | 34.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.212 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.349 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.021 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.066 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.040 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.938 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.562 |
| SRR2868004 | Drought Stress (root) | 0.469 |
| SRR2967015 | Control (root) | 0.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.061 |
| SRR9715741 | Leaf | 0.063 |
| SRR9715739 | Root | 1.338 |
| SRR9715742 | Root | 1.112 |
| SRR9715743 | Root | 1.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.482 |
| SRR8749028 | MeJA induced 9h | 1.017 |
| SRR8749029 | MeJA induced 9h | 1.790 |
| SRR8749030 | Uninduced | 0.242 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.912 |
| SRR8400027 | Control - Root | 1.299 |