Gene detail information of Glyur000226s00010852 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24140.1 | 7.00E-161 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003535395.2 | 0 | PREDICTED: uncharacterized protein LOC100811400 isoform X1 [Glycine max] |
| COG | YP_004776477.1 | 4.00E-11 | alpha/beta hydrolase [Cyclobacterium marinum DSM 745] |
| trEMBL | tr|I1LBX8|I1LBX8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G31580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00226 | 234675 | 239823 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000226s00010852.1 | PF12697.2 | Abhydrolase_6 | 203 | 449 | 3.80E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.628 |
| SRR1783600 | control | 10.136 |
| SRR1783602 | moderate drought stress | 5.984 |
| SRR1811619 | moderate drought stress | 5.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.087 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.715 |
| SRR2868004 | Drought Stress (root) | 15.630 |
| SRR2967015 | Control (root) | 9.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.402 |
| SRR9715740 | Leaf | 0.281 |
| SRR9715741 | Leaf | 1.508 |
| SRR9715739 | Root | 26.217 |
| SRR9715742 | Root | 4.542 |
| SRR9715743 | Root | 8.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.279 |
| SRR8749028 | MeJA induced 9h | 0.376 |
| SRR8749029 | MeJA induced 9h | 0.064 |
| SRR8749030 | Uninduced | 0.170 |
| SRR8749031 | Uninduced | 0.106 |
| SRR8749032 | Uninduced | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.757 |
| SRR8400027 | Control - Root | 37.417 |