Gene detail information of Glyur000226s00010844 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G18196.1 | 2.00E-66 | Heavy metal transport/detoxification superfamily protein |
| NR | XP_003536166.1 | 3.60E-110 | PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Glycine max] |
| COG | YP_007944127.1 | 7.00E-06 | copper ion binding protein [Desulfotomaculum gibsoniae DSM 7213] |
| Swissprot | tr|Q9SZN7|HIP26_ARATH | 4.00E-19 | Heavy metal-associated isoprenylated plant protein 26 (Precursor) |
| trEMBL | tr|K7LJY4|K7LJY4_SOYBN | 1.00E-110 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G31500.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00226 | 162934 | 165345 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000226s00010844.1 | PF00403.21 | HMA | 52 | 106 | 3.50E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.851 |
| SRR1783600 | control | 9.049 |
| SRR1783602 | moderate drought stress | 14.095 |
| SRR1811619 | moderate drought stress | 14.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.942 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.905 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.420 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.353 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 41.309 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.851 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.943 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.846 |
| SRR2868004 | Drought Stress (root) | 15.735 |
| SRR2967015 | Control (root) | 31.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.197 |
| SRR9715740 | Leaf | 7.343 |
| SRR9715741 | Leaf | 9.144 |
| SRR9715739 | Root | 0.437 |
| SRR9715742 | Root | 5.499 |
| SRR9715743 | Root | 4.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.093 |
| SRR8749030 | Uninduced | 0.003 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.519 |
| SRR8400027 | Control - Root | 7.083 |