Gene detail

Gene detail information of Glyur000226s00010822

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G05920.1	7.00E-90	Subtilase family protein
NR	XP_004496012.1	0	PREDICTED: subtilisin-like protease-like [Cicer arietinum]
COG	YP_003380257.1	1.00E-58	protease-associated PA domain-containing protein [Kribbella flavida DSM 17836]
Swissprot	tr\|O65351\|SUBL_ARATH	5.00E-101	Subtilisin-like protease (Precursor)
trEMBL	tr\|G7I5J6\|G7I5J6_MEDTR	0	Subtilisin-like serine protease {ECO:0000313\|EMBL:AES61117.2}

Sequence

Transcript Sequence

>Glyur000226s00010822.1
CTTATTAGTTAGCTGCTTAAAGAAGCCCCTGAATAATAATTAATGGAGCCTCAATTTCAGGTTCCGCTTCCATTGATTTTCTTCCTAATTATTGTTACTCCTTTGCTTAATTTAGTGGCTCTCCATGCCAACGCAGAAAGCTCCTCCTATATAGTCCACATGGACAAGTCCCTCATGCCTCAAGTCTTCGCGAGCCACCAGGATTGGTATGAGTCAACCATTCAATCCACAAAGTCATCACCAACAGCAGCACAGAAACTGGTGTACACTTACAATCACGCCTTGCATGGGTTCAGTGCAGTGCTATCACCAGACGAATTGGAGACACTAAAGAATTCCCACGGCTTTGTCACGGCCTACCCAGACAGAATAGCCACCATAGACACCACACACACCTTCGAGTTTCTCTCACTCGACCCCTCAATTGGGCTATGGAATGCATCCAATTTAGGGGAAGGCATCATCGTGGGTCTCATCGACAGTGGTGTGTGGCCAGAGAGTGATAGCTTTAAAGACGATGGCATGACGAAGCAAATCCCATCCAAATGGAAAGGGACATGCGAGCCAGGACAGGACTTCAACACCTCCATGTGTAACTTGAAGCTGATTGGGGCTAGATATTTCAACAAGGGTGTGATTGCAGCTAATCCTAAAGTCCCAATCAGCATGAACTCAGCAAGGGACACTCAGGGCCATGGGACCCACACGTCATCCACCGTGGCAGGCAACTATGTGAATGATGCATCTTTCTTTGGCTACGCCAAAGGTGTTGCCAGAGGCATTGCACCAAGGGCAAGGCTTGCCATGTACAAGGTGCTGTGGGACGAGGGGCGTCAAGCCTCTGATGTTCTTGCGGGGATGGACCAAGCAATTTCTGATGGGGTCGATGTTATTTCAATCTCTTTGGGGTTCGATAGTGTTCCACTCTATGAGGACCCAGTTGCTATAGCNTCTTTTGCAGCAATGGAGAAAGGTGTTGTGGTTTCATCTTCCGCGGGAAATGAAGGTCCAAATCTTGGTACCTTGCACAATGGAATCCCNTGGGTCCTAACAGTTGCAGCAGGAACCATAGACCGTACTTTCGGGAGCTTGAAACTCGGGAACGGCAAAACANTCGTAGGTTGGACCCTGTTTCCGGAAAACGCAATTGTTGAGNATCTCCAACTTGTCTACAACAAGACCCTCTCACCATGCAACTCGGTGAATCTCTTATCCAAAGCCGCCACAAGAGGGATCATTGTTTGTGAATCAGATTCAGTCTCAGCCCTCACCCAAATCAATGTTGTTACCGAGGCAAGTGTGGTAGGTGCTGTGTTTATCTCAGAGGATCCAAAACTAATAGAAACAGGACGCGTGTTCTCACCTAGTATTGTAATTAGTCCAAGGGACAGGACAACCCTAATGCACTACATAAAAAGTGTGGATTTCCCAACTGCAAGCATCAGGTTTCAACAAACATTTGTTGAGGAACAACAAAACCAGCAGCACCAGCTGTTGCATATTACACATCAAGAGGACCTTCACCTAGCTACCCGGGAATCTTAAAACCCGATGTAATGGCACCTGGGTCCAATGTTCTGGCTGCTTTTGTTCCCAATAAAGCATCAGCTAGAATTGGAACNAACGTGTTCCTACCAAGTGGTTACAATTTATTGTCTGGGACATCCATGGCATGCCCTCATGCATCTGGTGTTGCTGCTCTTTTGAAAGCTTCACACCCTGATTGGAGTGCTGCTGCTATAAGGTCTGCATTGGTTACAACCGCTAGCCCATTGGATAATACCCGTAACCCGATTNTGGACAATGGTTACCCATCTCAATTCGCTTCCCCTCTTGCGATGGGAGCCGGTGAGATTGACCCGAATAGAGCAATGGATCCGGGTTTTATTTATGATGCCACACCGCAGGACTATGTTGACCTTCTTTGTGGTTTGGGTTACACACGAAAACAAATATTGACTATTACGAGATCGAGCTCGTATAAATGTGCAAATGCAAACCCTTCGTCTGTTGACCTTAACTACCCTTCGTTTATTGCATTGTACGGAAACAAGACAAGGAATACAGTGGTGCGGAGGTTTCGGAGGATTGTGACGAATGTTGGGGANGGTGCTGCCACGTATAGAGTGAAAGTGGCGCAACCCAAGGGGTGTGTGGTCACGGTGTCACCTGACACGCTGGCATTTGGATATAAGCATGAGAAACAGAGCTACTCTGTTGTTATCAAGTATAAGAGGGACAAGAAGGGGAGTGTGTCGTTTGGGGACCTTGTTTGGGTTGAACAAGGTGGTGGTGCACGCACTGTTAGGAGCCCCATTGTAGTGGCACCGACCCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00226	52772	55225	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000226s00010822.1	PF05922.11	Inhibitor_I9	35	113	4.60E-15
Glyur000226s00010822.1	PF00082.17	Peptidase_S8	142	342	7.50E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.162
SRR1783600	control	0.173
SRR1783602	moderate drought stress	0.049
SRR1811619	moderate drought stress	0.049

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.093
DRR006520	Root Summer glycyrrhizin high producing strain	0.092
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.656
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.690

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.934
SRR2868004	Drought Stress (root)	0.341
SRR2967015	Control (root)	0.060

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.501
SRR9715740	Leaf	17.343
SRR9715741	Leaf	12.243
SRR9715739	Root	0.073
SRR9715742	Root	0.167
SRR9715743	Root	0.201

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.287
SRR8749028	MeJA induced 9h	1.268
SRR8749029	MeJA induced 9h	1.226
SRR8749030	Uninduced	2.950
SRR8749031	Uninduced	4.940
SRR8749032	Uninduced	6.856

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.099
SRR8400027	Control - Root	0.148