Gene detail information of Glyur000225s00014733 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40460.1 | 4.00E-101 | Major facilitator superfamily protein |
| NR | XP_003526819.1 | 4.21E-157 | PREDICTED: probable peptide/nitrate transporter At2g40460-like [Glycine max] |
| COG | YP_007874538.1 | 5.00E-20 | dipeptide/tripeptide permease D [Raoultella ornithinolytica B6] |
| Swissprot | tr|Q8VZR7|PTR30_ARATH | 6.00E-127 | Protein NRT1/ PTR FAMILY 5.1 |
| trEMBL | tr|I1KBA5|I1KBA5_SOYBN | 2.00E-157 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G15020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00225 | 137020 | 139161 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000225s00014733.1 | PF00854.16 | PTR2 | 95 | 289 | 1.00E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.305 |
| SRR1783600 | control | 3.428 |
| SRR1783602 | moderate drought stress | 1.590 |
| SRR1811619 | moderate drought stress | 1.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.011 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.602 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.550 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.661 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.568 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.318 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.200 |
| SRR2868004 | Drought Stress (root) | 0.116 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.630 |
| SRR9715740 | Leaf | 0.694 |
| SRR9715741 | Leaf | 0.591 |
| SRR9715739 | Root | 0.971 |
| SRR9715742 | Root | 1.941 |
| SRR9715743 | Root | 2.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.676 |
| SRR8749028 | MeJA induced 9h | 5.963 |
| SRR8749029 | MeJA induced 9h | 1.484 |
| SRR8749030 | Uninduced | 2.113 |
| SRR8749031 | Uninduced | 0.407 |
| SRR8749032 | Uninduced | 0.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.142 |
| SRR8400027 | Control - Root | 0.368 |