Gene detail

Gene detail information of Glyur000225s00014732

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G05340.1	9.00E-128	Peroxidase superfamily protein
NR	XP_003523269.1	0	PREDICTED: peroxidase 52-like isoform 1 [Glycine max]
Swissprot	tr\|A7NY33\|PER4_VITVI	1.00E-161	Peroxidase 4 {ECO:0000250\|UniProtKB:Q42578} (Precursor)
trEMBL	tr\|I1JY99\|I1JY99_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G39860.1}

Sequence

Transcript Sequence

>Glyur000225s00014732.1
AGCTAATTAAGTGAGCTGCTTAGAGGGAATTTAAGCAATCATCATGGCTCTGTNTTGTTCTAGATTAACGATCCTTTTGGCTCTCTCTGTTCTCATAATGGGGAGTGCCAATGCACAACTCTCTACAAACTTCTACTCCAGTTCTTGTCCAAAACTGGTTTCCACTGTAAAATCCACAGTACAATCCGCCATATCAAAGGAGACCCGCATGGGTGCTTCCCTCCTCCGCTTGTTCTTCCATGATTGCTTTGTCAATGGATGTGATGGTTCAATTCTACTGGATGACACATCAAGCTTTACAGGGGAGAAGAACGCAAACCCGAACAAGAACTCAGCTCTTGTTTCCTGCGCTGATATCCTTGCCATCGCTGCCAGAGACTCCGTTCAGATCCTTGGAGGACCTACTTGGAATGTTAAACTTGGAAGAAGAGACGCTAAGACGGCTAGCCAGTCTGCTGCCAACAACGGCATCCCTCCACCCACTTCTAACCTCAACCAACTCATCTCAAGATTCAGCGCTCTTGGACTTTCCACCAAGGACTTAGTCGCATTGTCTGGGGGTCACACGATTGGGCAAGCAAGGTGCACAAACTTCAGGGCACGAATCTACAACGAGACAAACATAGATAGCTCCTTTGCAAGCAGCAGGCAATCGAGCTGCCCCAGGGCATCAGGGTCAGGGGACAACAATTTGGCACCCCTTGATCTTCAGACACCAACTTCCTTCGACAACAGCTACTTCAAGAACCTTGTTCAGAAGAAGGGTCTCCTCCACTCTGATCAGCAACTCTTCAACGGTGGCTCCACCGACTCCATAGTGCGTGGCTACACCACTAACCCCAGCTCCTTCTCCTCTGATTTCGCCAGCGCCATGATCAAGATGGGAGATATCAGTCCTCTCACTGGATCCAACGGAGAGATCAGGAAGAATTGTAGAAGAACCAACTAATTANGTCCGAATATTATTAATTAATTAAAGGGGTCCTACGCATATATACATAATTGTCTTTGACATGTGTGCACAATAAGTTGGTTAAACATGTTTTTCATTGTCTTTCCTATTCAGAGCAGAGGACTCTGGTGTACCGTATCTTGCCTTGTCTTATTTTGCTTCTTTATTACTTTTTCTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00225	127574	129597	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000225s00014732.1	PF00141.18	peroxidase	42	264	3.10E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	24.156
SRR1783600	control	23.785
SRR1783602	moderate drought stress	12.222
SRR1811619	moderate drought stress	12.207

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.517
DRR006520	Root Summer glycyrrhizin high producing strain	4.479
DRR006521	Root Winter glycyrrhizin high producing strain	0.472
DRR006522	Root Winter glycyrrhizin high producing strain	0.573
DRR006523	Root Summer glycyrrhizin low producing strain	3.379
DRR006524	Root Summer glycyrrhizin low producing strain	3.306
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.113
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.531

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.976
SRR2868004	Drought Stress (root)	10.301
SRR2967015	Control (root)	10.948

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	138.655
SRR9715740	Leaf	72.170
SRR9715741	Leaf	90.792
SRR9715739	Root	7.997
SRR9715742	Root	12.296
SRR9715743	Root	11.791

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	846.452
SRR8749028	MeJA induced 9h	1403.430
SRR8749029	MeJA induced 9h	865.342
SRR8749030	Uninduced	291.437
SRR8749031	Uninduced	43.971
SRR8749032	Uninduced	72.527

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	30.907
SRR8400027	Control - Root	8.195