Gene detail information of Glyur000225s00014727 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64930.1 | 2.00E-64 | CPR5 protein, putative |
| NR | XP_003602473.1 | 0 | HYS1 [Medicago truncatula] |
| Swissprot | tr|Q9LV85|CPR5_ARATH | 2.00E-100 | Protein CPR-5 |
| trEMBL | tr|G7JA92|G7JA92_MEDTR | 0 | CPR5, putative {ECO:0000313|EMBL:AES72724.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00225 | 91659 | 95147 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.820 |
| SRR1783600 | control | 2.667 |
| SRR1783602 | moderate drought stress | 2.957 |
| SRR1811619 | moderate drought stress | 2.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.282 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.025 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.009 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.568 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.720 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.123 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.952 |
| SRR2868004 | Drought Stress (root) | 8.993 |
| SRR2967015 | Control (root) | 8.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.992 |
| SRR9715740 | Leaf | 3.780 |
| SRR9715741 | Leaf | 4.873 |
| SRR9715739 | Root | 3.414 |
| SRR9715742 | Root | 10.189 |
| SRR9715743 | Root | 8.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.405 |
| SRR8749028 | MeJA induced 9h | 6.762 |
| SRR8749029 | MeJA induced 9h | 4.231 |
| SRR8749030 | Uninduced | 5.298 |
| SRR8749031 | Uninduced | 2.788 |
| SRR8749032 | Uninduced | 3.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.875 |
| SRR8400027 | Control - Root | 9.700 |