Gene detail information of Glyur000225s00014717 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006575394.1 | 3.87E-22 | PREDICTED: uncharacterized protein LOC102670521 [Glycine max] |
| trEMBL | tr|I1JH90|I1JH90_SOYBN | 1.00E-22 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G38770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00225 | 42285 | 44606 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.838 |
| SRR1783600 | control | 0.721 |
| SRR1783602 | moderate drought stress | 1.830 |
| SRR1811619 | moderate drought stress | 2.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.777 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.763 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.195 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.301 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.673 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.757 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.463 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.522 |
| SRR2868004 | Drought Stress (root) | 0.973 |
| SRR2967015 | Control (root) | 1.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.687 |
| SRR9715740 | Leaf | 0.715 |
| SRR9715741 | Leaf | 1.059 |
| SRR9715739 | Root | 2.060 |
| SRR9715742 | Root | 6.114 |
| SRR9715743 | Root | 7.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.994 |
| SRR8749028 | MeJA induced 9h | 4.072 |
| SRR8749029 | MeJA induced 9h | 3.888 |
| SRR8749030 | Uninduced | 1.233 |
| SRR8749031 | Uninduced | 1.198 |
| SRR8749032 | Uninduced | 2.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.154 |
| SRR8400027 | Control - Root | 9.484 |