Gene detail information of Glyur000223s00013825 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G55280.1 | 2.00E-49 | Lipase/lipooxygenase, PLAT/LH2 family protein |
| NR | XP_003524193.1 | 4.98E-153 | PREDICTED: uncharacterized protein LOC100800626 [Glycine max] |
| trEMBL | tr|K7KQF7|K7KQF7_SOYBN | 2.00E-153 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G28800.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00223 | 242830 | 245374 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.594 |
| SRR1783600 | control | 4.332 |
| SRR1783602 | moderate drought stress | 8.571 |
| SRR1811619 | moderate drought stress | 8.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.426 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.719 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.743 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.714 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.076 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.057 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.302 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.694 |
| SRR2868004 | Drought Stress (root) | 24.755 |
| SRR2967015 | Control (root) | 23.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.837 |
| SRR9715740 | Leaf | 14.992 |
| SRR9715741 | Leaf | 17.083 |
| SRR9715739 | Root | 2.561 |
| SRR9715742 | Root | 6.669 |
| SRR9715743 | Root | 6.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.341 |
| SRR8749028 | MeJA induced 9h | 9.067 |
| SRR8749029 | MeJA induced 9h | 13.351 |
| SRR8749030 | Uninduced | 12.779 |
| SRR8749031 | Uninduced | 13.751 |
| SRR8749032 | Uninduced | 17.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.374 |
| SRR8400027 | Control - Root | 11.454 |