Gene detail information of Glyur000223s00013821 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G55265.1 | 8.00E-05 | Protein of unknown function, DUF538 |
| NR | XP_003629701.1 | 5.72E-19 | hypothetical protein MTR_8g085590 [Medicago truncatula] |
| trEMBL | tr|G7LHY3|G7LHY3_MEDTR | 2.00E-19 | DUF538 family protein {ECO:0000313|EMBL:AET04177.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00223 | 215466 | 215645 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.934 |
| SRR1783600 | control | 6.023 |
| SRR1783602 | moderate drought stress | 3.111 |
| SRR1811619 | moderate drought stress | 2.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.058 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.624 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.124 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.605 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.289 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.765 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.554 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.564 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.890 |
| SRR2868004 | Drought Stress (root) | 4.026 |
| SRR2967015 | Control (root) | 6.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.922 |
| SRR9715740 | Leaf | 1.638 |
| SRR9715741 | Leaf | 1.378 |
| SRR9715739 | Root | 5.450 |
| SRR9715742 | Root | 6.882 |
| SRR9715743 | Root | 3.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.161 |
| SRR8749028 | MeJA induced 9h | 0.975 |
| SRR8749029 | MeJA induced 9h | 0.583 |
| SRR8749030 | Uninduced | 0.447 |
| SRR8749031 | Uninduced | 1.788 |
| SRR8749032 | Uninduced | 0.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.824 |
| SRR8400027 | Control - Root | 12.321 |