Gene detail information of Glyur000223s00013788 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43490.1 | 3.00E-15 | |
| NR | KEH20650.1 | 0 | hypothetical protein MTR_8g081570 [Medicago truncatula] |
| trEMBL | tr|A0A072U486|A0A072U486_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KEH20650.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00223 | 10791 | 16682 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.296 |
| SRR1783600 | control | 13.360 |
| SRR1783602 | moderate drought stress | 19.177 |
| SRR1811619 | moderate drought stress | 18.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.321 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.201 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.369 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.444 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.453 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.606 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.335 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.517 |
| SRR2868004 | Drought Stress (root) | 23.013 |
| SRR2967015 | Control (root) | 23.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.926 |
| SRR9715740 | Leaf | 14.106 |
| SRR9715741 | Leaf | 17.633 |
| SRR9715739 | Root | 1.346 |
| SRR9715742 | Root | 9.749 |
| SRR9715743 | Root | 8.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 47.083 |
| SRR8749028 | MeJA induced 9h | 36.882 |
| SRR8749029 | MeJA induced 9h | 78.551 |
| SRR8749030 | Uninduced | 48.244 |
| SRR8749031 | Uninduced | 75.980 |
| SRR8749032 | Uninduced | 77.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.476 |
| SRR8400027 | Control - Root | 20.083 |