Gene detail information of Glyur000223s00013786 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16250.1 | 1.00E-56 | |
| NR | KHN22134.1 | 6.22E-96 | hypothetical protein glysoja_042891 [Glycine soja] |
| trEMBL | tr|I1L674|I1L674_SOYBN | 2.00E-96 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G38320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00223 | 4071 | 4598 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.644 |
| SRR1783600 | control | 13.918 |
| SRR1783602 | moderate drought stress | 9.209 |
| SRR1811619 | moderate drought stress | 9.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.971 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.477 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.130 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.121 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.708 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 58.084 |
| SRR2868004 | Drought Stress (root) | 14.240 |
| SRR2967015 | Control (root) | 24.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.187 |
| SRR9715740 | Leaf | 0.449 |
| SRR9715741 | Leaf | 0.359 |
| SRR9715739 | Root | 26.757 |
| SRR9715742 | Root | 6.122 |
| SRR9715743 | Root | 9.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.226 |
| SRR8749028 | MeJA induced 9h | 7.742 |
| SRR8749029 | MeJA induced 9h | 10.286 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.385 |
| SRR8400027 | Control - Root | 33.061 |