Gene detail information of Glyur000221s00012527 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17710.1 | 1.00E-24 | |
| NR | XP_003612251.1 | 1.02E-74 | hypothetical protein MTR_5g022970 [Medicago truncatula] |
| trEMBL | tr|G7JYR2|G7JYR2_MEDTR | 4.00E-75 | Uncharacterized protein {ECO:0000313|EMBL:AES95209.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00221 | 201389 | 204379 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.553 |
| SRR1783600 | control | 5.818 |
| SRR1783602 | moderate drought stress | 3.542 |
| SRR1811619 | moderate drought stress | 3.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.499 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.659 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.709 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.578 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.921 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.915 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 40.354 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 98.101 |
| SRR2868004 | Drought Stress (root) | 122.657 |
| SRR2967015 | Control (root) | 129.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.478 |
| SRR9715740 | Leaf | 34.798 |
| SRR9715741 | Leaf | 40.868 |
| SRR9715739 | Root | 2.983 |
| SRR9715742 | Root | 6.984 |
| SRR9715743 | Root | 5.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.599 |
| SRR8749028 | MeJA induced 9h | 0.489 |
| SRR8749029 | MeJA induced 9h | 0.546 |
| SRR8749030 | Uninduced | 0.420 |
| SRR8749031 | Uninduced | 0.802 |
| SRR8749032 | Uninduced | 0.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.641 |
| SRR8400027 | Control - Root | 13.729 |