Gene detail information of Glyur000221s00012524 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20310.1 | 6.00E-04 | |
| NR | KHN35994.1 | 1.18E-47 | hypothetical protein glysoja_003117 [Glycine soja] |
| Swissprot | tr|Q9SGS5|Y1607_ARATH | 1.00E-06 | Uncharacterized protein At1g76070 |
| trEMBL | tr|C6TIL4|C6TIL4_SOYBN | 5.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G08621.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00221 | 181219 | 181716 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.220 |
| SRR1783600 | control | 0.219 |
| SRR1783602 | moderate drought stress | 0.229 |
| SRR1811619 | moderate drought stress | 0.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.002 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.216 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.222 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.030 |
| SRR2868004 | Drought Stress (root) | 7.559 |
| SRR2967015 | Control (root) | 4.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.004 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.066 |
| SRR9715743 | Root | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.399 |
| SRR8749028 | MeJA induced 9h | 0.808 |
| SRR8749029 | MeJA induced 9h | 1.360 |
| SRR8749030 | Uninduced | 0.092 |
| SRR8749031 | Uninduced | 0.995 |
| SRR8749032 | Uninduced | 0.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.387 |
| SRR8400027 | Control - Root | 2.871 |