Gene detail information of Glyur000221s00012504 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51390.1 | 1.00E-31 | DHHC-type zinc finger family protein |
| NR | XP_004512238.1 | 3.53E-109 | PREDICTED: probable S-acyltransferase At3g51390-like [Cicer arietinum] |
| Swissprot | tr|Q7XA86|ZDH11_ARATH | 1.00E-65 | Protein S-acyltransferase 10 |
| trEMBL | tr|A0A072UDA0|A0A072UDA0_MEDTR | 5.00E-105 | S-acyltransferase {ECO:0000256|RuleBase:RU079119} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00221 | 74356 | 88390 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.855 |
| SRR1783600 | control | 9.182 |
| SRR1783602 | moderate drought stress | 7.374 |
| SRR1811619 | moderate drought stress | 7.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.317 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.897 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.242 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.032 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.622 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.736 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.360 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.538 |
| SRR2868004 | Drought Stress (root) | 32.430 |
| SRR2967015 | Control (root) | 30.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.657 |
| SRR9715740 | Leaf | 23.846 |
| SRR9715741 | Leaf | 26.453 |
| SRR9715739 | Root | 17.472 |
| SRR9715742 | Root | 19.163 |
| SRR9715743 | Root | 17.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.253 |
| SRR8749028 | MeJA induced 9h | 5.872 |
| SRR8749029 | MeJA induced 9h | 4.672 |
| SRR8749030 | Uninduced | 7.491 |
| SRR8749031 | Uninduced | 2.702 |
| SRR8749032 | Uninduced | 3.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.736 |
| SRR8400027 | Control - Root | 27.782 |