Gene detail information of Glyur000221s00012490 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G43180.2 | 1.00E-07 | Phosphoenolpyruvate carboxylase family protein |
| NR | XP_006603072.1 | 9.90E-09 | PREDICTED: carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic-like [Glycine max] |
| trEMBL | tr|A0A061ERJ7|A0A061ERJ7_THECC | 6.00E-09 | Phosphoenolpyruvate carboxylase family protein isoform 1 {ECO:0000313|EMBL:EOY04944.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00221 | 5937 | 6782 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.194 |
| SRR1783600 | control | 8.299 |
| SRR1783602 | moderate drought stress | 34.943 |
| SRR1811619 | moderate drought stress | 39.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.260 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 44.983 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 62.825 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 64.435 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.854 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.156 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 39.115 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.081 |
| SRR2868004 | Drought Stress (root) | 35.885 |
| SRR2967015 | Control (root) | 35.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.397 |
| SRR9715740 | Leaf | 7.039 |
| SRR9715741 | Leaf | 13.145 |
| SRR9715739 | Root | 3.030 |
| SRR9715742 | Root | 7.000 |
| SRR9715743 | Root | 5.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.325 |
| SRR8400027 | Control - Root | 33.901 |