Gene detail information of Glyur000220s00014774 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25450.1 | 1.00E-49 | Cytochrome bd ubiquinol oxidase, 14kDa subunit |
| NR | XP_011019762.1 | 6.60E-68 | PREDICTED: cytochrome b-c1 complex subunit 7-2-like [Populus euphratica] |
| Swissprot | tr|F4JWS8|QCR72_ARATH | 1.00E-62 | Cytochrome b-c1 complex subunit 7-2 |
| trEMBL | tr|B9H9S6|B9H9S6_POPTR | 2.00E-66 | Cytochrome b-c1 complex subunit 7 {ECO:0000256|PIRNR:PIRNR000022} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00220 | 108476 | 110828 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000220s00014774.1 | PF02271.11 | UCR_14kD | 16 | 109 | 3.10E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 86.796 |
| SRR1783600 | control | 87.317 |
| SRR1783602 | moderate drought stress | 43.142 |
| SRR1811619 | moderate drought stress | 41.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 75.269 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 94.955 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 45.380 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.675 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 105.141 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 105.611 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 66.072 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 81.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 229.129 |
| SRR2868004 | Drought Stress (root) | 171.701 |
| SRR2967015 | Control (root) | 145.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 216.282 |
| SRR9715740 | Leaf | 210.652 |
| SRR9715741 | Leaf | 194.541 |
| SRR9715739 | Root | 64.599 |
| SRR9715742 | Root | 88.350 |
| SRR9715743 | Root | 75.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 106.747 |
| SRR8749028 | MeJA induced 9h | 57.085 |
| SRR8749029 | MeJA induced 9h | 80.962 |
| SRR8749030 | Uninduced | 60.132 |
| SRR8749031 | Uninduced | 32.169 |
| SRR8749032 | Uninduced | 74.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 115.876 |
| SRR8400027 | Control - Root | 114.351 |