Gene detail information of Glyur000219s00011594 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16360.2 | 2.00E-36 | HPT phosphotransmitter 4 |
| NR | XP_003597677.1 | 5.74E-56 | Histidine phosphotransfer protein [Medicago truncatula] |
| Swissprot | tr|Q9LU15|AHP4_ARATH | 5.00E-37 | Histidine-containing phosphotransfer protein 4 |
| trEMBL | tr|G7IHZ9|G7IHZ9_MEDTR | 2.00E-56 | Histidine phosphotransfer protein {ECO:0000313|EMBL:AES67928.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00219 | 228431 | 229421 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.246 |
| SRR1783600 | control | 13.724 |
| SRR1783602 | moderate drought stress | 11.414 |
| SRR1811619 | moderate drought stress | 13.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.985 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.020 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.761 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.603 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.138 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.778 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.120 |
| SRR2868004 | Drought Stress (root) | 0.479 |
| SRR2967015 | Control (root) | 2.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.555 |
| SRR9715740 | Leaf | 0.933 |
| SRR9715741 | Leaf | 0.080 |
| SRR9715739 | Root | 0.981 |
| SRR9715742 | Root | 6.055 |
| SRR9715743 | Root | 5.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.968 |
| SRR8400027 | Control - Root | 4.912 |