Gene detail information of Glyur000219s00011569 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ACU14372.1 | 5.32E-10 | unknown [Glycine max] |
| trEMBL | tr|C6SYP9|C6SYP9_SOYBN | 2.00E-10 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU14372.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00219 | 85618 | 86588 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.167 |
| SRR1783600 | control | 0.095 |
| SRR1783602 | moderate drought stress | 0.201 |
| SRR1811619 | moderate drought stress | 0.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.025 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.481 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.135 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.892 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.122 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.537 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.778 |
| SRR2868004 | Drought Stress (root) | 2.240 |
| SRR2967015 | Control (root) | 1.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.900 |
| SRR9715740 | Leaf | 1.222 |
| SRR9715741 | Leaf | 1.194 |
| SRR9715739 | Root | 0.772 |
| SRR9715742 | Root | 0.486 |
| SRR9715743 | Root | 0.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.261 |
| SRR8749028 | MeJA induced 9h | 1.297 |
| SRR8749029 | MeJA induced 9h | 1.663 |
| SRR8749030 | Uninduced | 0.611 |
| SRR8749031 | Uninduced | 0.490 |
| SRR8749032 | Uninduced | 0.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.282 |
| SRR8400027 | Control - Root | 1.881 |